RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 BST1Q10588 318 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 PCLAFQ15004 111 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 ZRSR2Q15696 482 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 CHI3L2Q15782 390 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 LACTB2Q53H82 288 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 DEPDC1Q5TB30 811 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 ABHD17CQ6PCB6 329 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 FRMD7Q6ZUT3 714 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 GPRIN3Q6ZVF9 776 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 PDSS2Q86YH6 399 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 METTL27Q8N6F8 245 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 OR6Y1Q8NGX8 325 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 TRPC4APQ8TEL6 797 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 C10orf82Q8WW14 230 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 RNF31Q96EP0 1072 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 CNDP1Q96KN2 507 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 C7orf26Q96N11 449 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 UBL7Q96S82 380 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 MACROD1Q9BQ69 325 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 CRB3Q9BUF7 120 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 ADNPQ9H2P0 1102 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 PRM3Q9NNZ6 103 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 MS4A12Q9NXJ0 267 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 AHSPQ9NZD4 102 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 MRPS33Q9Y291 106 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 MAN2B2Q9Y2E5 1009 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 MRPS2Q9Y399 296 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 RRP15Q9Y3B9 282 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 RNF11Q9Y3C5 154 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 SPACA6W5XKT8 324 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 PKD1L2Q7Z442 2459 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 ZFHX4Q86UP3 3567 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 CDC14CA4D256 554 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 IDSB3KWA1 339 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 SGK494L7N484 410 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 PSMD12O00232 456 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 CNOT3O75175 753 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 UMODP07911 640 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 PRKAR1AP10644 381 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 RNH1P13489 461 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 HNRNPH1P31943 449 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 XCR1P46094 333 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 NAGLUP54802 743 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 OCRLQ01968 901 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 IL10RAQ13651 578 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 AP5B1Q2VPB7 878 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 ATG16L1Q676U5 607 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 TRPM8Q7Z2W7 1104 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 ZC3H7AQ8IWR0 971 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 KIRREL3Q8IZU9 778 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 GBP7Q8N8V2 638 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 RGMAQ96B86 450 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 TBC1D20Q96BZ9 403 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 YIPF2Q9BWQ6 316 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 GSTO2Q9H4Y5 243 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 LYRM4Q9HD34 91 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 C19orf25Q9UFG5 118 aaPredicted RBP13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 C3orf18Q9UK00 162 aa13.22□□□□□ -0.29
PKNOX1-209ENST00000560448 SERTM1A2A2V5 107 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 MAGEB17A8MXT2 336 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 NPHS1O60500 1241 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 ULK1O75385 1050 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 RDH16O75452 317 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 TBX6O95947 436 aaPredicted RBP13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 STATHP02808 62 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 HMOX2P30519 316 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 RAP1GDS1P52306 607 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 EMP2P54851 167 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 CORO7P57737 925 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 RAB8AP61006 207 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 BTN3A2P78410 334 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 CSTF3Q12996 717 aaKnown RBP13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 VWA2Q5GFL6 755 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 LETMD1Q6P1Q0 360 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 CCDC121Q6ZUS5 278 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 PRSS41Q7RTY9 318 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 MRGPREQ86SM8 312 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 ZCCHC7Q8N3Z6 543 aaKnown RBP13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 CCNYL1Q8N7R7 359 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 AGAP11Q8TF27 550 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 METTL21AQ8WXB1 218 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 TTC9Q92623 222 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 QRFPRQ96P65 431 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 CDK15Q96Q40 435 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 MTERF1Q99551 399 aaKnown RBP13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 ARHGAP9Q9BRR9 750 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 SOX17Q9H6I2 414 aaPredicted RBP13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 EML4Q9HC35 981 aaKnown RBP13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 ADAM29Q9UKF5 820 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 G3BP2Q9UN86 482 aaKnown RBP13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 MMACHCQ9Y4U1 282 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 KCNMB2Q9Y691 235 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 LAMA5O15230 3695 aa13.21□□□□□ -0.3
PKNOX1-209ENST00000560448 LOC102723996A0A087X1L8 192 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 CLDN4O14493 209 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 CHST10O43529 356 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 TGFB1P01137 390 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 HEXBP07686 556 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms