RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 AP2B1P63010 937 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 IRF8Q02556 426 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 ZNF33BQ06732 778 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 RUNX2Q13950 521 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 ABHD17BQ5VST6 288 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 LRRC70Q7Z2Q7 622 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 UHMK1Q8TAS1 419 aaKnown RBP13.8□□□□□ -0.2
IDH3A-219ENST00000560414 WDR34Q96EX3 536 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 FAR2Q96K12 515 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 FMO2Q99518 471 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 LPAR4Q99677 370 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.8□□□□□ -0.2
IDH3A-219ENST00000560414 KCNK13Q9HB14 408 aa13.8□□□□□ -0.2
IDH3A-219ENST00000560414 A0A087X1B8 175 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 CYSRT1A8MQ03 144 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 A8MUA0 341 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 MAN1A2O60476 641 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 AGFG2O95081 481 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 ALDOAP04075 364 aaKnown RBP13.79□□□□□ -0.2
IDH3A-219ENST00000560414 TYK2P29597 1187 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 GPC1P35052 558 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 RNF144AP50876 292 aaPredicted RBP13.79□□□□□ -0.2
IDH3A-219ENST00000560414 EXT1Q16394 746 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 FAM83EQ2M2I3 478 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 GLE1Q53GS7 698 aaKnown RBP13.79□□□□□ -0.2
IDH3A-219ENST00000560414 QSOX2Q6ZRP7 698 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 M1APQ8TC57 530 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 QRFPRQ96P65 431 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 F2RL3Q96RI0 385 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 NPAS2Q99743 824 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 EFCAB11Q9BUY7 163 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 PITHD1Q9GZP4 211 aaPredicted RBP13.79□□□□□ -0.2
IDH3A-219ENST00000560414 REXO4Q9GZR2 422 aaKnown RBP13.79□□□□□ -0.2
IDH3A-219ENST00000560414 VPS11Q9H270 941 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 CLK4Q9HAZ1 481 aaKnown RBP13.79□□□□□ -0.2
IDH3A-219ENST00000560414 NECTIN3Q9NQS3 549 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 AGPAT4Q9NRZ5 378 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 OPTCQ9UBM4 332 aa13.79□□□□□ -0.2
IDH3A-219ENST00000560414 TRAV17A0A0B4J275 112 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 BLACEA4D250 179 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 ANKUB1A6NFN9 424 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 LRRC14BA6NHZ5 514 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 K7EPI3 171 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 KIF2AO00139 706 aaPredicted RBP13.78□□□□□ -0.2
IDH3A-219ENST00000560414 SH3BGRLO75368 114 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 KLHL2O95198 593 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 TUBB4AP04350 444 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 CERS1P27544 350 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 GSTM2P28161 218 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 MSH2P43246 934 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 SERPINB8P50452 374 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 SLC26A5P58743 744 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 SRSF11Q05519 484 aaKnown RBP13.78□□□□□ -0.2
IDH3A-219ENST00000560414 LAPTM5Q13571 262 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 TBCCQ15814 346 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 HIST2H2ACQ16777 129 aaPredicted RBP13.78□□□□□ -0.2
IDH3A-219ENST00000560414 PFKFB4Q16877 469 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 ADPRMQ3LIE5 342 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 PAGE2BQ5JRK9 111 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 ACER2Q5QJU3 275 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 HIST2H2AA3Q6FI13 130 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 H3F3CQ6NXT2 135 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 ABHD17CQ6PCB6 329 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 CEP128Q6ZU80 1094 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 CRLF3Q8IUI8 442 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 BEST3Q8N1M1 668 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 PLD6Q8N2A8 252 aaKnown RBP13.78□□□□□ -0.2
IDH3A-219ENST00000560414 KIF2BQ8N4N8 673 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 TMEM52Q8NDY8 209 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 OR2L5Q8NG80 312 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 KIF18AQ8NI77 898 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 RHEBL1Q8TAI7 183 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 UBTD2Q8WUN7 234 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 SLC44A1Q8WWI5 657 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 SEC16BQ96JE7 1060 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 GPR78Q96P69 363 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 FUT8Q9BYC5 575 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 MMP25Q9NPA2 562 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 TEKT2Q9UIF3 430 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 SVILO95425 2214 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 HIVEP3Q5T1R4 2406 aa13.78□□□□□ -0.2
IDH3A-219ENST00000560414 IGKV3D-11A0A0A0MRZ8 115 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 TCRBV16S1A1N1A0A5B0 115 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 OR5H15A6NDH6 313 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 SYCE1LA8MT33 242 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 POC1B-GALNT4F8VUJ3 575 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 B3GALT2O43825 422 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 INHBAP08476 426 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 RNF224P0DH78 156 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 PCNAP12004 261 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 GFAPP14136 432 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 CASP2P42575 452 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 HNRNPFP52597 415 aaKnown RBP13.77□□□□□ -0.21
IDH3A-219ENST00000560414 E2F2Q14209 437 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 ACAP2Q15057 778 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 RPUSD3Q6P087 351 aaKnown RBP13.77□□□□□ -0.21
IDH3A-219ENST00000560414 TRIM40Q6P9F5 258 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 CCDC91Q7Z6B0 441 aa13.77□□□□□ -0.21
IDH3A-219ENST00000560414 UBE3DQ7Z6J8 389 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms