RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 C1orf94Q6P1W5 598 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 PAMR1Q6UXH9 720 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 TMPPEQ6ZT21 453 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 TMEM5Q9Y2B1 443 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 PCDHGB2Q9Y5G2 931 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 NPIPA2E9PIF3 369 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 NPIPA3F8WFD2 350 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 LILRB3O75022 631 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 SDC3O75056 442 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 CREG1O75629 220 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 OR4D2P58180 307 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 RPS27LQ71UM5 84 aaKnown RBP12.97□□□□□ -0.33
TRAF3-208ENST00000560371 CANT1Q8WVQ1 401 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 LMAN1LQ9HAT1 526 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 LAMP5Q9UJQ1 280 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 POU2F3Q9UKI9 436 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 FAM170BA6NMN3 283 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 K7ERQ8 282 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 CBLP22681 906 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 EDNRAP25101 427 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 CLRN1P58418 232 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF678Q5SXM1 525 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 RARRES3Q9UL19 164 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 EFCAB9A8MZ26 197 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 NPPAP01160 153 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 FECHP22830 423 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 S100A1P23297 94 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 CAPZA1P52907 286 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 TIGD6Q17RP2 521 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF382Q96SR6 550 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ANKRA2Q9H9E1 313 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ASB6Q9NWX5 421 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 CSTAP01040 98 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ENDOUP21128 410 aaKnown RBP12.97□□□□□ -0.33
TRAF3-208ENST00000560371 AZGP1P25311 298 aaKnown RBP12.97□□□□□ -0.33
TRAF3-208ENST00000560371 SLC18A1P54219 525 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 DAG1Q14118 895 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 GBX1Q14549 363 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF630Q2M218 657 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-208ENST00000560371 LACTB2Q53H82 288 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-208ENST00000560371 CLLU1OSQ5K130 101 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 RNF111Q6ZNA4 994 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF627Q7L945 461 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 TTC9BQ8N6N2 239 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ZSCAN4Q8NAM6 433 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-208ENST00000560371 OR9I1Q8NGQ6 314 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 CD320Q9NPF0 282 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 LAMA4Q16363 1823 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ARPC2O15144 300 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 CYP17A1P05093 508 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 PGAM2P15259 253 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 GSTM4Q03013 218 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 LPAL2Q16609 132 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 ACTR3BQ9P1U1 418 aa12.97□□□□□ -0.33
TRAF3-208ENST00000560371 MYO5AQ9Y4I1 1855 aaKnown RBP12.96□□□□□ -0.33
TRAF3-208ENST00000560371 SLC16A5O15375 505 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 DNAJB13P59910 316 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 NSDHLQ15738 373 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 CATSPEREQ5SY80 951 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 OGFOD2Q6N063 350 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 ARL9Q6T311 187 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 TIFABQ6ZNK6 161 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 PIGWQ7Z7B1 504 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 JAGN1Q8N5M9 183 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 RAB8BQ92930 207 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 CCDC115Q96NT0 180 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 ALPK1Q96QP1 1244 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 PELOQ9BRX2 385 aaKnown RBP12.96□□□□□ -0.33
TRAF3-208ENST00000560371 BRF2Q9HAW0 419 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 PCDHB14Q9Y5E9 798 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF670-ZNF695F2Z2N8 137 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 WDR77Q9BQA1 342 aaPredicted RBP12.96□□□□□ -0.33
TRAF3-208ENST00000560371 TRPM6Q9BX84 2022 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 CXorf21Q9HAI6 301 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 HHATLQ9HCP6 504 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 COMMD3Q9UBI1 195 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 FER1L6Q2WGJ9 1857 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 S100A6P06703 90 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 HCKP08631 526 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 ACSL1P33121 698 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 FAM86B1Q8N7N1 296 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 VILLO15195 856 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 SLC3A1Q07837 685 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 PPP1R8Q12972 351 aaKnown RBP12.96□□□□□ -0.33
TRAF3-208ENST00000560371 MED28Q9H204 178 aa12.96□□□□□ -0.33
TRAF3-208ENST00000560371 IGKV6-21A0A0C4DH24 114 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 SMCO3A2RU48 225 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 TLR4O00206 839 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 GSK3BP49841 420 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 RORCP51449 518 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 AKR1D1P51857 326 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 FRMD7Q6ZUT3 714 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 NUP43Q8NFH3 380 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 OR5L2Q8NGL0 311 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 RPLP0P6Q8NHW5 317 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 SNTG1Q9NSN8 517 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 IFT52Q9Y366 437 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 J3QLW9 94 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 MATN2O00339 956 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms