RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 LIFP15018 202 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 AMD1P17707 334 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 TNNI3P19429 210 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 FBLP22087 321 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 PAICSP22234 425 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 CYP2F1P24903 491 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ACKR3P25106 362 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 DNAJB1P25685 340 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 PSMA5P28066 241 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 MDH1P40925 334 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 NLRP11P59045 1033 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 TRA2BP62995 288 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ZXDBP98169 803 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 SP3Q02447 781 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 GABPB1Q06547 395 aaPredicted RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ELP6Q0PNE2 266 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 KIF5AQ12840 1032 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 CNTN1Q12860 1018 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 KEAP1Q14145 624 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 KRT81Q14533 505 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 TMEM132DQ14C87 1099 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 EXT1Q16394 746 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 PDLIM3Q53GG5 364 aaPredicted RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 HERC4Q5GLZ8 1057 aaPredicted RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 TECRLQ5HYJ1 363 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 RIPPLY2Q5TAB7 128 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 IL23RQ5VWK5 629 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF776Q68DI1 518 aaPredicted RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 HIST2H2AA3Q6FI13 130 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 NADSYN1Q6IA69 706 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 RTL6Q6ICC9 239 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 TCEAL6Q6IPX3 200 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 SLC25A24Q6NUK1 477 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 GDPD4Q6W3E5 623 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 MEX3BQ6ZN04 569 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 SH2D5Q6ZV89 423 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 Q71RC1 249 aaPredicted RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 CPEB2Q7Z5Q1 589 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 CUZD1Q86UP6 607 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 AMZ2Q86W34 360 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 MISPQ8IVT2 679 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ZC3H3Q8IXZ2 948 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 KIRREL3Q8IZU9 778 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 GPC2Q8N158 579 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF843Q8N446 348 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 BANPQ8N9N5 519 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 KBTBD3Q8NAB2 608 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 DENND6BQ8NEG7 585 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 OR6M1Q8NGM8 313 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 OR4C3Q8NH37 302 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 FBXO30Q8TB52 745 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 SAP25Q8TEE9 199 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 NUDCD2Q8WVJ2 157 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 TM9SF4Q92544 642 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 PHYHIPQ92561 330 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 HIST1H2ACQ93077 130 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 SLC35C1Q96A29 364 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 RAB7BQ96AH8 199 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 RAB39BQ96DA2 213 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 THOC3Q96J01 351 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF479Q96JC4 524 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 MAGED4Q96JG8 741 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF48Q96MX3 618 aaPredicted RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 NECTIN4Q96NY8 510 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 KRT12Q99456 494 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 C1QTNF4Q9BXJ3 329 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 CCSER1Q9C0I3 900 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 DPEP3Q9H4B8 488 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ZDHHC6Q9H6R6 413 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 ACTR8Q9H981 624 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 VAT1LQ9HCJ6 419 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 HPS4Q9NQG7 708 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 FARSBQ9NSD9 589 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 INTS9Q9NV88 658 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 GTSE1Q9NYZ3 720 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 CNOT2Q9NZN8 540 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 FLRT3Q9NZU0 649 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 VPS54Q9P1Q0 977 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 EPHA6Q9UF33 1036 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 IL20RAQ9UHF4 553 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 LAMP5Q9UJQ1 280 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 PILRBQ9UKJ0 227 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 PILRAQ9UKJ1 303 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 GRID1Q9ULK0 1009 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 SATB2Q9UPW6 733 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 MGAT4BQ9UQ53 548 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 MRPS2Q9Y399 296 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 RRP15Q9Y3B9 282 aaKnown RBP2.07□□□□□ -2.08
GABPB1-209ENST00000559100 OR1A2Q9Y585 309 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 SELENOKQ9Y6D0 94 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 IKBKGQ9Y6K9 419 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 UBE4BO95155 1302 aa2.07□□□□□ -2.08
GABPB1-209ENST00000559100 SYNJ2BP-COX16A0A087WUM0 186 aa2.06□□□□□ -2.08
GABPB1-209ENST00000559100 IGHV4-61A0A0C4DH41 118 aa2.06□□□□□ -2.08
GABPB1-209ENST00000559100 A0A0G2JLW4 131 aa2.06□□□□□ -2.08
GABPB1-209ENST00000559100 FAM230AA0A1W2PPH8 454 aa2.06□□□□□ -2.08
GABPB1-209ENST00000559100 TMEM89A2RUT3 159 aa2.06□□□□□ -2.08
GABPB1-209ENST00000559100 TRIM64CA6NLI5 447 aa2.06□□□□□ -2.08
GABPB1-209ENST00000559100 ANKRD30BLA7E2S9 258 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms