RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 CCSER1Q9C0I3 900 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 SCPEP1Q9HB40 452 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 RCOR3Q9P2K3 495 aaPredicted RBP5.45□□□□□ -1.54
RTF1-204ENST00000558117 HAO1Q9UJM8 370 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 GTF3C4Q9UKN8 822 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 ICAM5Q9UMF0 924 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 NTNG1Q9Y2I2 539 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 RNF215Q9Y6U7 377 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 UNC13CQ8NB66 2214 aa5.45□□□□□ -1.54
RTF1-204ENST00000558117 E2F3O00716 465 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 PLRG1O43660 514 aaKnown RBP5.44□□□□□ -1.54
RTF1-204ENST00000558117 DPM1O60762 260 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 KDM4BO94953 1096 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 SCGB1D1O95968 90 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 APOA4P06727 396 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 HOXB5P09067 269 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 CXCL8P10145 99 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 GOT1P17174 413 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 MAOAP21397 527 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 MUTP22033 750 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 HNRNPH3P31942 346 aaKnown RBP5.44□□□□□ -1.54
RTF1-204ENST00000558117 NLRP5P59047 1200 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 ERVFC1-1P60608 527 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 NOP14P78316 857 aaKnown RBP5.44□□□□□ -1.54
RTF1-204ENST00000558117 IFI35P80217 286 aaPredicted RBP5.44□□□□□ -1.54
RTF1-204ENST00000558117 WASHC5Q12768 1159 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 FZD2Q14332 565 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 CEBPEQ15744 281 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 TBCEQ15813 527 aaPredicted RBP5.44□□□□□ -1.54
RTF1-204ENST00000558117 CST6Q15828 149 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 RILPL1Q5EBL4 403 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 PPP6R3Q5H9R7 873 aaPredicted RBP5.44□□□□□ -1.54
RTF1-204ENST00000558117 PLEKHA7Q6IQ23 1121 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 WDR73Q6P4I2 378 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 CEP97Q8IW35 865 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 CCDC83Q8IWF9 413 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 DIS3L2Q8IYB7 885 aaKnown RBP5.44□□□□□ -1.54
RTF1-204ENST00000558117 WFDC11Q8NEX6 87 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 IL12RB2Q99665 862 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 OMDQ99983 421 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 ACBD6Q9BR61 282 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 TMEM121Q9BTD3 319 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 DDA1Q9BW61 102 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 C1QTNF5Q9BXJ0 243 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 CALN1Q9BXU9 219 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 NDST4Q9H3R1 872 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 HINT3Q9NQE9 182 aaKnown RBP5.44□□□□□ -1.54
RTF1-204ENST00000558117 AAR2Q9Y312 384 aaKnown RBP5.44□□□□□ -1.54
RTF1-204ENST00000558117 MYH10P35580 1976 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 TRRAPQ9Y4A5 3859 aa5.44□□□□□ -1.54
RTF1-204ENST00000558117 A0A087WWV3 80 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 SAA2-SAA4A0A096LPE2 208 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 hCG_1807616A0A1W2PRN6 198 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 GTPBP10A4D1E9 387 aaKnown RBP5.43□□□□□ -1.54
RTF1-204ENST00000558117 TTC36A6NLP5 189 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 LDB3O75112 727 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 HSPA4LO95757 839 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 FTCDO95954 541 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 SNRNP70P08621 437 aaKnown RBP5.43□□□□□ -1.54
RTF1-204ENST00000558117 SPARCP09486 303 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 IL7RP16871 459 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 MX1P20591 662 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 ACAT1P24752 427 aaKnown RBP5.43□□□□□ -1.54
RTF1-204ENST00000558117 FOLH1Q04609 750 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 SCARB2Q14108 478 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 DUS1LQ6P1R4 473 aaKnown RBP5.43□□□□□ -1.54
RTF1-204ENST00000558117 TRIM69Q86WT6 500 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 ZC3H3Q8IXZ2 948 aaKnown RBP5.43□□□□□ -1.54
RTF1-204ENST00000558117 DSELQ8IZU8 1212 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 LMX1AQ8TE12 382 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 FAM131CQ96AQ9 280 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 INTS12Q96CB8 462 aaKnown RBP5.43□□□□□ -1.54
RTF1-204ENST00000558117 BICD1Q96G01 975 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 C3orf30Q96M34 536 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 PDCL3Q9H2J4 239 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 PPP1R3EQ9H7J1 279 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 DDX31Q9H8H2 851 aaKnown RBP5.43□□□□□ -1.54
RTF1-204ENST00000558117 MMP25Q9NPA2 562 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 EHD2Q9NZN4 543 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 SUN2Q9UH99 717 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 ZNF711Q9Y462 761 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 PCLOQ9Y6V0 5065 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 CITO14578 2027 aa5.43□□□□□ -1.54
RTF1-204ENST00000558117 FAM237AA0A1B0GTK4 181 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 A0A1B0GUV1 79 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 LMO7DNF2Z398 122 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 K7ERI5 159 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 CLGNO14967 610 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 SLC37A4O43826 429 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 SEC14L2O76054 403 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 PGM3O95394 542 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 PMS2P2O95744 297 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 FAM200BP0CF97 657 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 PSMA3P25788 255 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 DRD3P35462 400 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 RPL7AP62424 266 aaKnown RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 OLR1P78380 273 aa5.42□□□□□ -1.54
RTF1-204ENST00000558117 CEBPZQ03701 1054 aaKnown RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 ZNF155Q12901 538 aaPredicted RBP5.42□□□□□ -1.54
RTF1-204ENST00000558117 FRG1Q14331 258 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms