RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 KLHL6Q8WZ60 621 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 MED8Q96G25 268 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC22A4Q9H015 551 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 REEP4Q9H6H4 257 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 NMNAT1Q9HAN9 279 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC25A19Q9HC21 320 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 STUB1Q9UNE7 303 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 SNX7Q9UNH6 387 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 KLHL20Q9Y2M5 609 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 LSM2Q9Y333 95 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 CMAHPQ9Y471 501 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 PRAMEF33A0A0G2JMD5 474 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 A0A1W2PQ09 198 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF670-ZNF695F2Z2N8 137 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 TLR4O00206 839 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 PRAMEF10O60809 474 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ENTPD6O75354 484 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 C6orf47O95873 294 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 GASTP01350 101 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 GSTM1P09488 218 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 SOX3P41225 446 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 NAE1Q13564 534 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 SPHARQ15513 63 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF79Q15937 498 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF385BQ569K4 471 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 DGKKQ5KSL6 1271 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 TMEM173Q86WV6 379 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC34A3Q8N130 599 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 PCSK9Q8NBP7 692 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 OR9Q1Q8NGQ5 310 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ASZ1Q8WWH4 475 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 TMEM80Q96HE8 168 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 TTYH2Q9BSA4 534 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 SLA2Q9H6Q3 261 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 C1GALT1Q9NS00 363 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ABCB8Q9NUT2 735 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 PAQR5Q9NXK6 330 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 SSR3Q9UNL2 185 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ANGPT4Q9Y264 503 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 IQCMA0A1B0GVH7 501 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 LINC00854A0A1B0GVQ3 168 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 A0A1W2PQ67 120 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 TRBC2A0A5B9 178 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 CCDC182A6NF36 153 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM25AB3EWG3 89 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM25CB3EWG5 89 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM25GB3EWG6 89 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 TFECO14948 347 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 NDUFB5O43674 189 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF821O75541 412 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 IFNW1P05000 195 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 GALTP07902 379 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 YES1P07947 543 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 SRPRAP08240 638 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 CKMT1AP12532 417 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 LHCGRP22888 699 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 CHI3L1P36222 383 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 SNRPGP62308 76 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 FOXD4Q12950 439 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ASAH1Q13510 395 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 TAB1Q15750 504 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ADNP2Q6IQ32 1131 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ERAP2Q6P179 960 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 AGTRAPQ6RW13 159 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 RAVER1Q8IY67 606 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 OR7G3Q8NG95 312 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 HUS1BQ8NHY5 278 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 IL4I1Q96RQ9 567 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 MND1Q9BWT6 205 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 ELAC1Q9H777 363 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 FZD3Q9NPG1 666 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 TIGARQ9NQ88 270 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 TMPRSS11EQ9UL52 423 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 MAP4K5Q9Y4K4 846 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 CCDC88CQ9P219 2028 aa11.31□□□□□ -0.6
VIPAS39-211ENST00000557658 NOTOA8MTQ0 251 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 ARHGEF33A8MVX0 844 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 CSO75390 466 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 ALX3O95076 343 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 CTGFP29279 349 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 CRYBB2P43320 205 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 SNRPD1P62314 119 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 EEF1A2Q05639 463 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF763Q0D2J5 394 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 SLAMF1Q13291 335 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 LARS2Q15031 903 aaKnown RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 NCF4Q15080 339 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF648Q5T619 568 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM92BQ6ZTR7 304 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 RASGRP3Q8IV61 690 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 OR7G1Q8NGA0 311 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 GRPEL2Q8TAA5 225 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC7A6Q92536 515 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 TRIM63Q969Q1 353 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 SUV39H2Q9H5I1 410 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 GPBP1L1Q9HC44 474 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 C11orf16Q9NQ32 467 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 ACSL6Q9UKU0 697 aa11.3□□□□□ -0.6
VIPAS39-211ENST00000557658 RAB23Q9ULC3 237 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms