RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ADNP2Q6IQ32 1131 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 ABHD17CQ6PCB6 329 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 QSOX2Q6ZRP7 698 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 CPEB2Q7Z5Q1 589 aaKnown RBP11.77□□□□□ -0.53
SLIRP-211ENST00000557623 ZNF605Q86T29 641 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 PTRH1Q86Y79 214 aaKnown RBP11.77□□□□□ -0.53
SLIRP-211ENST00000557623 KBTBD2Q8IY47 623 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 CYP4X1Q8N118 509 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 CA13Q8N1Q1 262 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 MREGQ8N565 214 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 TEX19Q8NA77 164 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 HUS1BQ8NHY5 278 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 ZNF483Q8TF39 744 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-211ENST00000557623 QRFPRQ96P65 431 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 F2RL3Q96RI0 385 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 TUBB6Q9BUF5 446 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 ERVK-6Q9BXR3 956 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 RBCK1Q9BYM8 510 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 LHPPQ9H008 270 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 ZNF160Q9HCG1 818 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 LANCL2Q9NS86 450 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 PSD3Q9NYI0 1048 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 RAB21Q9UL25 225 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 GRID1Q9ULK0 1009 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 MRPS33Q9Y291 106 aaKnown RBP11.77□□□□□ -0.53
SLIRP-211ENST00000557623 STK38LQ9Y2H1 464 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 RNF11Q9Y3C5 154 aa11.77□□□□□ -0.53
SLIRP-211ENST00000557623 CPAMD8Q8IZJ3 1885 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 A0A0G2JN53 185 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 K7EM74 188 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 FOXE1O00358 373 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 CLDN4O14493 209 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 COPEO14579 308 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 DLX3O60479 287 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 PRMT3O60678 531 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 B4GALT2O60909 372 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 DNAJB6O75190 326 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 CDC123O75794 336 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 SUPT7LO94864 414 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 MYL2P10916 166 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 KRT4P19013 534 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 NR1D1P20393 614 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 IMPDH1P20839 514 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 PTX3P26022 381 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 TSFMP43897 325 aaKnown RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 RAP1GDS1P52306 607 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 PRKAA2P54646 552 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 RAB38P57729 211 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 NAA20P61599 178 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 RAPSNQ13702 412 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 ABRAXAS2Q15018 415 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 PCOLCEQ15113 449 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 ZRSR2Q15696 482 aaKnown RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 NSDHLQ15738 373 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 GGTA1PQ4G0N0 100 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 ZNF678Q5SXM1 525 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 DEPDC1Q5TB30 811 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 AGAP7PQ5VUJ5 663 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 TTC19Q6DKK2 380 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 RIPOR1Q6ZS17 1223 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 SH2D5Q6ZV89 423 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 MILR1Q7Z6M3 343 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 ANKRD37Q7Z713 158 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 MYRIPQ8NFW9 859 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 OR52B6Q8NGF0 335 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 OR2W6PQ8NHA6 318 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 TM9SF4Q92544 642 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 RGMAQ96B86 450 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 THOC3Q96J01 351 aaKnown RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 NSUN5Q96P11 429 aaKnown RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 AGAP4Q96P64 663 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 ZNF552Q9H707 407 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 ZBTB26Q9HCK0 441 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 SEMA4BQ9NPR2 832 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-211ENST00000557623 DMRT3Q9NQL9 472 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 PRDM7Q9NQW5 492 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 MID2Q9UJV3 735 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 PPT2Q9UMR5 302 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 MMACHCQ9Y4U1 282 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 SPACA6W5XKT8 324 aa11.76□□□□□ -0.53
SLIRP-211ENST00000557623 MASP2O00187 686 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 SUV39H1O43463 412 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 SCELO95171 688 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 MLYCDO95822 493 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 F12P00748 615 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-211ENST00000557623 PDGFAP04085 211 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 SERPINA7P05543 415 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 CERS1P27544 350 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 DEKP35659 375 aaKnown RBP11.75□□□□□ -0.53
SLIRP-211ENST00000557623 SSR2P43308 183 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 EFNA3P52797 238 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 RPS13P62277 151 aaKnown RBP11.75□□□□□ -0.53
SLIRP-211ENST00000557623 CLCQ05315 142 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 SLC18A2Q05940 514 aa11.75□□□□□ -0.53
SLIRP-211ENST00000557623 ACTN3Q08043 901 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-211ENST00000557623 IFT88Q13099 833 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms