RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 UNQ6126/PRO20091Q6UXV3 157 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 CEACAM20Q6UY09 585 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 TMEM64Q6YI46 380 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 SLC24A5Q71RS6 500 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 ERASQ7Z444 233 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 CERS5Q8N5B7 392 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 LRRC17Q8N6Y2 441 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 FAM71CQ8NEG0 241 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 GPRC5AQ8NFJ5 357 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 SECTM1Q8WVN6 248 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 RAB39BQ96DA2 213 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 NXPE2Q96DL1 559 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 BPIFA2Q96DR5 249 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 MARK4Q96L34 752 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 SSX3Q99909 188 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 LRRC1Q9BTT6 524 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 FUNDC2Q9BWH2 189 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 NUSAP1Q9BXS6 441 aaKnown RBP2.83□□□□□ -1.96
TRAV28-201ENST00000557548 NMNAT2Q9BZQ4 307 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 CPVLQ9H3G5 476 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 ZNF665Q9H7R5 613 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 MARCH7Q9H992 704 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 UPF2Q9HAU5 1272 aaKnown RBP2.83□□□□□ -1.96
TRAV28-201ENST00000557548 ZBTB20Q9HC78 741 aaPredicted RBP2.83□□□□□ -1.96
TRAV28-201ENST00000557548 VAT1LQ9HCJ6 419 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 ECHDC1Q9NTX5 307 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 EXOC1Q9NV70 894 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 TBC1D13Q9NVG8 400 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 PILRBQ9UKJ0 227 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 HPCAL4Q9UM19 191 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 FAF1Q9UNN5 650 aaPredicted RBP2.83□□□□□ -1.96
TRAV28-201ENST00000557548 MGAT4BQ9UQ53 548 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 WDR37Q9Y2I8 494 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 MRPS2Q9Y399 296 aaKnown RBP2.83□□□□□ -1.96
TRAV28-201ENST00000557548 MFHAS1Q9Y4C4 1052 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 ABCC4O15439 1325 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 NPC1L1Q9UHC9 1359 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 NCAPD2Q15021 1401 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 TTC3P53804 2025 aa2.83□□□□□ -1.96
TRAV28-201ENST00000557548 A0A0U1RQV5 110 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 ATP6AP2A0A1C7CYW4 349 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 FAM230AA0A1W2PPH8 454 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 TLX2O43763 284 aaPredicted RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 VPS26AO75436 327 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SNX4O95219 450 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 ZBTB11O95625 1053 aaPredicted RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 APBB3O95704 486 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 CALCAP01258 141 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SERPINF2P08697 491 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 CT45A8P0DMV1 189 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 CT45A9P0DMV2 189 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 THRBP10828 461 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 DAOP14920 347 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 FBLP22087 321 aaKnown RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 PAICSP22234 425 aaKnown RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 ACKR3P25106 362 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 PSMA5P28066 241 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 NR2C2P49116 596 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 HOXA1P49639 335 aaPredicted RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 GBX2P52951 348 aaPredicted RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 DVL1P1P54792 670 aaPredicted RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 HSF2Q03933 536 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 FUT7Q11130 342 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 COX10Q12887 443 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 GPR17Q13304 367 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SNX1Q13596 522 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 KEAP1Q14145 624 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 BTG3Q14201 252 aaPredicted RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 LRRC37A5PQ49AS3 106 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 CEP55Q53EZ4 464 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 AGKQ53H12 422 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 CT45A2Q5DJT8 189 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 LCN1P1Q5VSP4 162 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 IL23RQ5VWK5 629 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 LIPKQ5VXJ0 399 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SNRNP48Q6IEG0 339 aaKnown RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 C16orf87Q6PH81 154 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 FAM159AQ6UWV7 190 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 C15orf52Q6ZUT6 534 aaKnown RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 TUBA1AQ71U36 451 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 TRMT1LQ7Z2T5 733 aaKnown RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.82□□□□□ -1.96
TRAV28-201ENST00000557548 ISCA2Q86U28 154 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 MISPQ8IVT2 679 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SLC43A2Q8N370 569 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 BCORP1Q8N888 145 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 KBTBD3Q8NAB2 608 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SLC37A3Q8NCC5 494 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 CCDC197Q8NCU1 140 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 OR6M1Q8NGM8 313 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 OR13C5Q8NGS8 318 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 OR2T34Q8NGX1 318 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 OR4L1Q8NH43 312 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 BRSK1Q8TDC3 778 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 GANCQ8TET4 914 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SLC5A11Q8WWX8 675 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 PHYHIPQ92561 330 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 NEUROG1Q92886 237 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 SLC35C1Q96A29 364 aa2.82□□□□□ -1.96
TRAV28-201ENST00000557548 RTP4Q96DX8 246 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms