RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	GLYATL1P3	A0A0U1RQE8	302 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	LOC285095	A0A1B0GVY8	99 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	AGAP14	A8MT82	685 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	ISM1	B1AKI9	464 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	KLRC4-KLRK1	H3BQV0	150 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	CES2	O00748	559 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	GAPDHS	O14556	408 aa	Predicted RBP	4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	HOXA3	O43365	443 aa	Predicted RBP	4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	NME2P1	O60361	137 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	SMPD2	O60906	423 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	SLC25A12	O75746	678 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	FKBP9	O95302	570 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	SIX3	O95343	332 aa	Predicted RBP	4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	EPO	P01588	193 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	CYC1	P08574	325 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	ATP1B2	P14415	290 aa	Predicted RBP	4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	TFEB	P19484	476 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	MCM3	P25205	808 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	ACVR2A	P27037	513 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	PDHA2	P29803	388 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	AKT1	P31749	480 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	PRLHR	P49683	370 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	ARSE	P51690	589 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	WNT3A	P56704	352 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	C21orf58	P58505	322 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	EEF1A2	Q05639	463 aa	Known RBP	4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	SNTB1	Q13884	538 aa	Known RBP	4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	FASTK	Q14296	549 aa	Known RBP	4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	MUM1	Q2TAK8	710 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	FBXL19-AS1	Q494R0	122 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	FILIP1L	Q4L180	1135 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	CMPK2	Q5EBM0	449 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	PPP1R2P3	Q6NXS1	205 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	FAM151B	Q6UXP7	276 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	DET1	Q7L5Y6	550 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	DAAM2	Q86T65	1068 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	NT5DC3	Q86UY8	548 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	ADGRG3	Q86Y34	549 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	HIPK1	Q86Z02	1210 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	TBC1D21	Q8IYX1	336 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	OR5M3	Q8NGP4	307 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	FAM71B	Q8TC56	605 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	M1AP	Q8TC57	530 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	HM13	Q8TCT9	377 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	PIGT	Q969N2	578 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	MVB12A	Q96EY5	273 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	LRRC46	Q96FV0	321 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	CYTH2	Q99418	400 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	NPAS2	Q99743	824 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	SELENOS	Q9BQE4	189 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	SLC25A51	Q9H1U9	297 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	MMP25	Q9NPA2	562 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	INTS7	Q9NVH2	962 aa	Known RBP	4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	C14orf105	Q9NVL8	296 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	ANKRD10	Q9NXR5	420 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	HACD3	Q9P035	362 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	PKP3	Q9Y446	797 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	SPO11	Q9Y5K1	396 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	KLK4	Q9Y5K2	254 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	ATP6V1D	Q9Y5K8	247 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	MEGF8	Q7Z7M0	2845 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	ZNF407	Q9C0G0	2248 aa		4.4	□□□□□ -1.71
SCFD1-223	ENST00000557076	GOLGA6L4	A6NEF3	574 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	TUBAL3	A6NHL2	446 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	GABRR3	A8MPY1	467 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	BCKDK	O14874	412 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	TFEC	O14948	347 aa	Predicted RBP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	PRPF4	O43172	522 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	PHF1	O43189	567 aa	Predicted RBP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	GPR39	O43194	453 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	HS6ST1	O60243	411 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	KDM1A	O60341	852 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	AP2A1	O95782	977 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	SLC4A1	P02730	911 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	C8orf89	P0DMQ9	161 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	GAA	P10253	952 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	RALB	P11234	206 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	MAG	P20916	626 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	PTX3	P26022	381 aa	Predicted RBP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	ACADL	P28330	430 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	UQCRC1	P31930	480 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	AVPR1B	P47901	424 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	CYB561	P49447	251 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	IFI35	P80217	286 aa	Predicted RBP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	OC90	Q02509	493 aa	Predicted RBP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	MESD	Q14696	234 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	EXT1	Q16394	746 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	PRTG	Q2VWP7	1150 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	BTBD16	Q32M84	506 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	FCRLB	Q6BAA4	426 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	UNC5D	Q6UXZ4	953 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076		Q6YL49	198 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	B3GNT6	Q6ZMB0	384 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	YTHDF3	Q7Z739	585 aa	Known RBP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	RPS19BP1	Q86WX3	136 aa	Known RBP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	KIF18B	Q86Y91	864 aa		4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.39	□□□□□ -1.71
SCFD1-223	ENST00000557076	CRLF3	Q8IUI8	442 aa		4.39	□□□□□ -1.71

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