RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 GPR50Q13585 617 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 SIX1Q15475 284 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-221ENST00000556534 IQCCQ4KMZ1 466 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 SLC10A5Q5PT55 438 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 TEX35Q5T0J7 233 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 PLPP4Q5VZY2 271 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 Q71RC1 249 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-221ENST00000556534 SLC25A42Q86VD7 318 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 KLHL7Q8IXQ5 586 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 SLC43A2Q8N370 569 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 ATAD1Q8NBU5 361 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 KIAA0895Q8NCT3 520 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 GOT1L1Q8NHS2 421 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-221ENST00000556534 AFAP1L1Q8TED9 768 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 CKAP2Q8WWK9 683 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 SMPDL3AQ92484 453 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 ATP6V1E2Q96A05 226 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 CCDC114Q96M63 670 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 PARK7Q99497 189 aaKnown RBP3.63□□□□□ -1.83
SCFD1-221ENST00000556534 PUS3Q9BZE2 481 aaKnown RBP3.63□□□□□ -1.83
SCFD1-221ENST00000556534 JPT2Q9H910 190 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 TUFT1Q9NNX1 390 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 STYXL1Q9Y6J8 313 aa3.63□□□□□ -1.83
SCFD1-221ENST00000556534 OOEPA6NGQ2 149 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 SRRM4A7MD48 611 aaKnown RBP3.62□□□□□ -1.83
SCFD1-221ENST00000556534 H0YIG0 161 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 INPP4BO15327 924 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 P2RX6O15547 441 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 SLC7A4O43246 635 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 BCL3P20749 454 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 OAS2P29728 719 aaKnown RBP3.62□□□□□ -1.83
SCFD1-221ENST00000556534 LIMK2P53671 638 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 KRTAP10-3P60369 221 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 ZFP36L1Q07352 338 aaKnown RBP3.62□□□□□ -1.83
SCFD1-221ENST00000556534 KNOP1Q1ED39 458 aaKnown RBP3.62□□□□□ -1.83
SCFD1-221ENST00000556534 ZNF776Q68DI1 518 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-221ENST00000556534 MCM10Q7L590 875 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 TIPARPQ7Z3E1 657 aaKnown RBP3.62□□□□□ -1.83
SCFD1-221ENST00000556534 OR8H3Q8N146 312 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 SLC35C1Q96A29 364 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 BPIFA2Q96DR5 249 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 PINK1Q9BXM7 581 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 ZWILCHQ9H900 591 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 TSPAN16Q9UKR8 245 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 TMED7Q9Y3B3 224 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 FER1L5A0AVI2 2057 aa3.62□□□□□ -1.83
SCFD1-221ENST00000556534 HCFC1P51610 2035 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 CCDC162PA2VCL2 907 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 TCP10L2B9ZVM9 353 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 BCL2L11O43521 198 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 FGF19O95750 216 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 CD1DP15813 335 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 ITIH1P19827 911 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 CTNNA1P35221 906 aaKnown RBP3.61□□□□□ -1.83
SCFD1-221ENST00000556534 FRKP42685 505 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-221ENST00000556534 FKBP1BP68106 108 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 ABRQ12979 859 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 MEP1BQ16820 701 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 NHSL2Q5HYW2 709 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 SIGLEC15Q6ZMC9 328 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 OTOAQ7RTW8 1153 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 SNX32Q86XE0 403 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 AQP12AQ8IXF9 295 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 SPEM1Q8N4L4 309 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 ZNF713Q8N859 430 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-221ENST00000556534 OR13C5Q8NGS8 318 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 RFT1Q96AA3 541 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 NABP1Q96AH0 204 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 VMP1Q96GC9 406 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 C1orf147Q96MC9 270 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-221ENST00000556534 JAKMIP1Q96N16 626 aaKnown RBP3.61□□□□□ -1.83
SCFD1-221ENST00000556534 TAAR6Q96RI8 345 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 CCM2Q9BSQ5 444 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 RPP25Q9BUL9 199 aaKnown RBP3.61□□□□□ -1.83
SCFD1-221ENST00000556534 ADNPQ9H2P0 1102 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 SRD5A3Q9H8P0 318 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 MOB1AQ9H8S9 216 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 GRPEL1Q9HAV7 217 aa3.61□□□□□ -1.83
SCFD1-221ENST00000556534 NME6O75414 186 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-221ENST00000556534 CLN5O75503 358 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 PRDM1O75626 825 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 GRAP2O75791 330 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 SLU7O95391 586 aaKnown RBP3.6□□□□□ -1.83
SCFD1-221ENST00000556534 TGDSO95455 350 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 SLC16A8O95907 504 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 LMO2P25791 158 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 TNNT3P45378 269 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-221ENST00000556534 ZFP36L2P47974 494 aaKnown RBP3.6□□□□□ -1.83
SCFD1-221ENST00000556534 GSK3BP49841 420 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 KHKP50053 298 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 AKAP17AQ02040 695 aaKnown RBP3.6□□□□□ -1.83
SCFD1-221ENST00000556534 CEACAM7Q14002 265 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 C3AR1Q16581 482 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 HIGD2BQ4VC39 106 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 CATSPER3Q86XQ3 398 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 SIAH3Q8IW03 269 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 OR4N5Q8IXE1 308 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 SPAG16Q8N0X2 631 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 RNF149Q8NC42 400 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms