RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 MAGEB10Q96LZ2 347 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 FRG2BQ96QU4 278 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 SLC25A23Q9BV35 468 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 NUDT9Q9BW91 350 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 ROGDIQ9GZN7 287 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF700Q9H0M5 742 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF160Q9HCG1 818 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 OXSMQ9NWU1 459 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 KCMF1Q9P0J7 381 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 PPT2Q9UMR5 302 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 TP53TG5Q9Y2B4 290 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 PLLPQ9Y342 182 aa12.16□□□□□ -0.46
MTHFD1-208ENST00000554739 NSG1A0A0A6YYJ2 146 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 IGHV3-20A0A0C4DH32 117 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 PSMD12O00232 456 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 CYR61O00622 381 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 PRMT3O60678 531 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 SCELO95171 688 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 ETHE1O95571 254 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 CREB1P16220 341 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 NR1D1P20393 614 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 HIST1H1TP22492 207 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 CERS1P27544 350 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 TSFMP43897 325 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 ARFIP1P53367 373 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 NAGLUP54802 743 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 LIM2P55344 173 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 DNAJB13P59910 316 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 BTG2P78543 158 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 EEF1A2Q05639 463 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 RAPSNQ13702 412 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 MYBPC3Q14896 1274 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 PCOLCEQ15113 449 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 NSDHLQ15738 373 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 AP5B1Q2VPB7 878 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 KRT71Q3SY84 523 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 LACTB2Q53H82 288 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 C10orf62Q5T681 223 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 OR4C11Q6IEV9 310 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF793Q6ZN11 406 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 LANCL3Q6ZV70 420 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 ASB18Q6ZVZ8 466 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 CPEB2Q7Z5Q1 589 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 AMER2Q8N7J2 671 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 MYRIPQ8NFW9 859 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 TSLPQ969D9 159 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 APOPT1Q96IL0 206 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF382Q96SR6 550 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 WDR77Q9BQA1 342 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 SORBS1Q9BX66 1292 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF717Q9BY31 904 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 GSTO2Q9H4Y5 243 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 ZNF552Q9H707 407 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 GPR83Q9NYM4 423 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 TRPS1Q9UHF7 1281 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 DAPP1Q9UN19 280 aa12.15□□□□□ -0.46
MTHFD1-208ENST00000554739 CCDC151A5D8V7 595 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 PLPP1O14494 284 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 UBFD1O14562 309 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 SPAG7O75391 227 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 OR4F21O95013 312 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 MLYCDO95822 493 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 MAOAP21397 527 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 ITGA3P26006 1051 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 PGDP52209 483 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 HNRNPFP52597 415 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 RAB38P57729 211 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 PHEXP78562 749 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 NFATC3Q12968 1075 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 LCP2Q13094 533 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 IFT88Q13099 833 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 SGO1Q5FBB7 561 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 BEND6Q5SZJ8 279 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 FAM219BQ5XKK7 198 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 TTC19Q6DKK2 380 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 QSOX2Q6ZRP7 698 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 GPRIN3Q6ZVF9 776 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 KBTBD2Q8IY47 623 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 CCNYL1Q8N7R7 359 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 TMEM52Q8NDY8 209 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 ARMC2Q8NEN0 867 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 PTCHD1Q96NR3 888 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 ZIM3Q96PE6 472 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 SMC6Q96SB8 1091 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 SMAD5Q99717 465 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 MAPKAP1Q9BPZ7 522 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 TUBB6Q9BUF5 446 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 ELOVL6Q9H5J4 265 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 COPS7BQ9H9Q2 264 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 LYRM4Q9HD34 91 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 PRM3Q9NNZ6 103 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 PRDM9Q9NQV7 894 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 FARSBQ9NSD9 589 aaKnown RBP12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 C19orf25Q9UFG5 118 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 PCDHGB7Q9Y5F8 929 aa12.14□□□□□ -0.47
MTHFD1-208ENST00000554739 CCDC88CQ9P219 2028 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 IGKV3D-11A0A0A0MRZ8 115 aa12.13□□□□□ -0.47
MTHFD1-208ENST00000554739 TCRBV16S1A1N1A0A5B0 115 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms