RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TMEM68Q96MH6 324 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC38A2Q96QD8 506 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 GAL3ST1Q99999 423 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 TMEM175Q9BSA9 504 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 COPS4Q9BT78 406 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SNRNP25Q9BV90 132 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 C1QTNF3Q9BXJ4 246 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 NUSAP1Q9BXS6 441 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 MRPL4Q9BYD3 311 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 GPR63Q9BZJ6 419 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SEMA4CQ9C0C4 833 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF436Q9C0F3 470 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 DNTTIP1Q9H147 329 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 MROH8Q9H579 483 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 POMKQ9H5K3 350 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 TDRD3Q9H7E2 651 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 MINDY3Q9H8M7 445 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 IL1RL2Q9HB29 575 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 HHATLQ9HCP6 504 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 FZD3Q9NPG1 666 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 HEBP1Q9NRV9 189 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CISHQ9NSE2 258 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 GPATCH2Q9NW75 528 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 GFOD1Q9NXC2 390 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 RDH8Q9NYR8 311 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CNOT2Q9NZN8 540 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SLAMF8Q9P0V8 285 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 AASSQ9UDR5 926 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PLEKHB1Q9UF11 243 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 RPS6KA6Q9UK32 745 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 UTS2RQ9UKP6 389 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC39A10Q9ULF5 831 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 FZD1Q9UP38 647 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ENTPD4Q9Y227 616 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF451Q9Y4E5 1061 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 MAB21L2Q9Y586 359 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PCDHGA6Q9Y5G7 932 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 FNDC1Q4ZHG4 1894 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ITGB4P16144 1822 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 GLYATL1P3A0A0U1RQE8 302 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 UBA6A0AVT1 1052 aaPredicted RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM74A7A6NL05 159 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF729A6NN14 1252 aaPredicted RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 INMT-MINDY4F8WBC2 141 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 AZIN1O14977 448 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 CASC3O15234 703 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 CD3EAPO15446 510 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 NUPL2O15504 423 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC7A4O43246 635 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 AKAP8O43823 692 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 RECQL5O94762 991 aaPredicted RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 SOX30O94993 753 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 APOL3O95236 402 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 POMCP01189 267 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 IFNGP01579 166 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 CSF2P04141 144 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 S100A8P05109 93 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 SCG5P05408 212 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 ITGB1P05556 798 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 GLAP06280 429 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 EPHX1P07099 455 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 HOXC4P09017 264 aaPredicted RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 FBP1P09467 338 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 CYP4B1P13584 511 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 NPR1P16066 1061 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 PTAFRP25105 342 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 EPHA2P29317 976 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC6A1P30531 599 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 RORAP35398 523 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 ATP5C1P36542 298 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 RFC3P40938 356 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 CSKP41240 450 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 RPL35P42766 123 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 RPL34P49207 117 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 RORCP51449 518 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 GPR143P51810 404 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 CRISP3P54108 245 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 PSMD4P55036 377 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 ERVK-8P63133 956 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 EEF1A1P68104 462 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 EEF1A2Q05639 463 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 DSC1Q08554 894 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 MRPL28Q13084 256 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 SERINC3Q13530 473 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 TP53BP2Q13625 1128 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 KCNAB1Q14722 419 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 PAFAH1B3Q15102 231 aaKnown RBP5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 GPR68Q15743 365 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 WSCD2Q2TBF2 565 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM74A3Q4VXF1 159 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 ARHGAP15Q53QZ3 475 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 HES5Q5TA89 166 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 EEF1A1P5Q5VTE0 462 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 MZT2BQ6NZ67 158 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 NOTUMQ6P988 496 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 USP53Q70EK8 1073 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 AHSA2Q719I0 299 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 BRINP3Q76B58 766 aa5.07□□□□□ -1.6
LSM3P2-201ENST00000551246 TMPRSS7Q7RTY8 843 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms