RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 PDPRQ8NCN5 879 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 OSBPL10Q9BXB5 764 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 AASSQ9UDR5 926 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 SPATA2Q9UM82 520 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 HCN4Q9Y3Q4 1203 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 B4GALT2O60909 372 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 MAGEA12P43365 314 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 C5orf22Q49AR2 442 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 DEFB134Q4QY38 66 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 PRRT3Q5FWE3 981 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 NAGSQ8N159 534 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 MRPL43Q8N983 215 aaKnown RBP15.63■□□□□ 0.09
CUX1-213ENST00000549414 ISL2Q96A47 359 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 BIRC8Q96P09 236 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 ZNF696Q9H7X3 374 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 KCNK12Q9HB15 430 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 RBMX2Q9Y388 322 aaKnown RBP15.63■□□□□ 0.09
CUX1-213ENST00000549414 IRAK3Q9Y616 596 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 NUMBLQ9Y6R0 609 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 LY75O60449 1722 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 TCF3P15923 654 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 TIMP2P16035 220 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 SLC6A11P48066 632 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 MLLT10P55197 1068 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 MYBPC1Q00872 1141 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 TUBB3Q13509 450 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 MYBPC3Q14896 1274 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 NDUFA9Q16795 377 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 EXOC3L2Q2M3D2 409 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 TCEAL5Q5H9L2 206 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 MPP7Q5T2T1 576 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 CES4AQ5XG92 561 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 FAM220AQ7Z4H9 259 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 FEVQ99581 238 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 HCFC2Q9Y5Z7 792 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 DOCK1Q14185 1865 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 RIIAD1A6NNX1 92 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 SLC7A9P82251 487 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 GSTM4Q03013 218 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 SUZ12Q15022 739 aaKnown RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 EIF4HQ15056 248 aaKnown RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 TSTQ16762 297 aaKnown RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 TMPRSS11AQ6ZMR5 421 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 Q6ZSR9 355 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 FUNDC1Q8IVP5 155 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 CPXM2Q8N436 756 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 OR8K5Q8NH50 307 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 MACROD1Q9BQ69 325 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 DOHHQ9BU89 302 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 ANKHQ9HCJ1 492 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 FAM170BA6NMN3 283 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 BTN3A3O00478 584 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 LSM1O15116 133 aaKnown RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 PSIP1O75475 530 aaKnown RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 STT3AP46977 705 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 CLCN7P51798 805 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 CST6Q15828 149 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 ZNF554Q86TJ5 538 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 CARM1Q86X55 608 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 TNFRSF12AQ9NP84 129 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 ARMC1Q9NVT9 282 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 NUP214P35658 2090 aaPredicted RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 OR52A4PA6NMU1 304 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 SCAMP2O15127 329 aaKnown RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 PGRMC2O15173 223 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 ZNF234Q14588 700 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 AP3S1Q92572 193 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 ZC4H2Q9NQZ6 224 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 COMMD3Q9UBI1 195 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 ACSL5Q9ULC5 683 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 DUXAA6NLW8 204 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 H0YAE9 185 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 MT-ND2P03891 347 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 MTHFD2P13995 350 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 BLKP51451 505 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 IL18Q14116 193 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 CXXC5Q7LFL8 322 aaKnown RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 OR4N5Q8IXE1 308 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 HDAC2Q92769 488 aaKnown RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 TEX37Q96LM6 180 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 TUBB1Q9H4B7 451 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 NKIRAS2Q9NYR9 191 aa15.62■□□□□ 0.09
CUX1-213ENST00000549414 RPL36Q9Y3U8 105 aaKnown RBP15.62■□□□□ 0.09
CUX1-213ENST00000549414 CDC123O75794 336 aaPredicted RBP15.61■□□□□ 0.09
CUX1-213ENST00000549414 CSTF2P33240 577 aaKnown RBP eCLIP15.61■□□□□ 0.09
CUX1-213ENST00000549414 LGALS3BPQ08380 585 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 SLAMF1Q13291 335 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 MZT2BQ6NZ67 158 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 UGT2A3Q6UWM9 527 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 HSDL2Q6YN16 418 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 LILRA3Q8N6C8 439 aaPredicted RBP15.61■□□□□ 0.09
CUX1-213ENST00000549414 OR2A12Q8NGT7 310 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 CIDECQ96AQ7 238 aaPredicted RBP15.61■□□□□ 0.09
CUX1-213ENST00000549414 PLAC1Q9HBJ0 212 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 DNMT3BQ9UBC3 853 aaKnown RBP15.61■□□□□ 0.09
CUX1-213ENST00000549414 SLC22A1O15245 554 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 VEGFDO43915 354 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 C1SP09871 688 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 HSD3B1P14060 373 aa15.61■□□□□ 0.09
CUX1-213ENST00000549414 GNSP15586 552 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms