RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 LSM7Q9UK45 103 aaKnown RBP9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 SLC6A14Q9UN76 642 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 NOX1Q9Y5S8 564 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 SNX8Q9Y5X2 465 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 DSPPQ9NZW4 1301 aa9.46□□□□□ -0.89
SMARCD1-205ENST00000548573 ALPK3Q96L96 1907 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 PRAMEF33A0A0G2JMD5 474 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 FADS2P1A8MWK0 482 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 M0R129 80 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 QSOX1O00391 747 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 PRAMEF10O60809 474 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 GPR37L1O60883 481 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 C6orf47O95873 294 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 POU2F1P14859 743 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 SELPP16109 830 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 ZNF8P17098 575 aaPredicted RBP9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 CSTF2P33240 577 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 CNR2P34972 360 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 RORCP51449 518 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 RPS13P62277 151 aaKnown RBP9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 SNRPGP62308 76 aaKnown RBP9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 PRKCZQ05513 592 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 PDE7AQ13946 482 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 ZNF770Q6IQ21 691 aaPredicted RBP9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 ADNP2Q6IQ32 1131 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 MED27Q6P2C8 311 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 OR8H2Q8N162 312 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 ARL14EPQ8N8R7 260 aaPredicted RBP9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC43A3Q8NBI5 491 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 GPR156Q8NFN8 814 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 OR4K1Q8NGD4 311 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 MED8Q96G25 268 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 ASPNQ9BXN1 380 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 ROGDIQ9GZN7 287 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 HHATLQ9HCP6 504 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 B4GALT6Q9UBX8 382 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 SEC14L4Q9UDX3 406 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 KCND3Q9UK17 655 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 CLEC4EQ9ULY5 219 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 HS3ST2Q9Y278 367 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 LSM2Q9Y333 95 aaKnown RBP9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 V9GYH0 126 aa9.46□□□□□ -0.9
SMARCD1-205ENST00000548573 SEMA3DO95025 777 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 ADAP00813 363 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 GASTP01350 101 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 CATP04040 527 aaKnown RBP9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 FURINP09958 794 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 ARAFP10398 606 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 ZNF30P17039 623 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 PSMA1P25786 263 aaKnown RBP9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 RPS19P39019 145 aaKnown RBP9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 MAPK9P45984 424 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 RPS5P46782 204 aaKnown RBP9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 TP53BP2Q13625 1128 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 GPNMBQ14956 572 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 NCF4Q15080 339 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 TMEM201Q5SNT2 666 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 RNLSQ5VYX0 342 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 KIAA1841Q6NSI8 718 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 C22orf39Q6P5X5 142 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 ZNF517Q6ZMY9 492 aaPredicted RBP9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 RAB43Q86YS6 212 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 ASB15Q8WXK1 588 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 VPS35Q96QK1 796 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 CNPPD1Q9BV87 410 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 VN1R3Q9BXE9 311 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 NMNAT1Q9HAN9 279 aaPredicted RBP9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 GPBP1L1Q9HC44 474 aaPredicted RBP9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 TAS2R9Q9NYW1 312 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 NDOR1Q9UHB4 597 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 CD84Q9UIB8 345 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 OGDHLQ9ULD0 1010 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 ANGPT4Q9Y264 503 aa9.45□□□□□ -0.9
SMARCD1-205ENST00000548573 IQCMA0A1B0GVH7 501 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TRBC2A0A5B9 178 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 CENPXA8MT69 81 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ZNF670-ZNF695F2Z2N8 137 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 FOXE1O00358 373 aaPredicted RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ZNF197O14709 1029 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 SCO2O43819 266 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 MTX2O75431 263 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 POP4O95707 220 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 IFNW1P05000 195 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ITGB7P26010 798 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 IMPA1P29218 277 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 RFX2P48378 723 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 STK19P49842 368 aaPredicted RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 CASP9P55211 416 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 DCDC1P59894 354 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 POLR2LP62875 67 aaKnown RBP9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 PSPHP78330 225 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 DOC2BQ14184 412 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 SPHARQ15513 63 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ZFP69Q49AA0 526 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 ARMC4Q5T2S8 1044 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 NXNL2Q5VZ03 156 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TXNDC8Q6A555 127 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 UNC5DQ6UXZ4 953 aa9.44□□□□□ -0.9
SMARCD1-205ENST00000548573 TMPRSS11AQ6ZMR5 421 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms