RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 P4HTMQ9NXG6 502 aa6.34□□□□□ -1.39
CCDC60-205ENST00000546345 SAE1Q9UBE0 346 aaPredicted RBP6.34□□□□□ -1.39
CCDC60-205ENST00000546345 UBA2Q9UBT2 640 aaPredicted RBP6.34□□□□□ -1.39
CCDC60-205ENST00000546345 ASIC3Q9UHC3 531 aa6.34□□□□□ -1.39
CCDC60-205ENST00000546345 TINAGQ9UJW2 476 aa6.34□□□□□ -1.39
CCDC60-205ENST00000546345 PTBP2Q9UKA9 531 aaKnown RBP6.34□□□□□ -1.39
CCDC60-205ENST00000546345 DRG1Q9Y295 367 aaKnown RBP6.34□□□□□ -1.39
CCDC60-205ENST00000546345 ARHGAP21Q5T5U3 1957 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 HIVEP2P31629 2446 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 IQANK1A0A1B0GTG1 560 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 OR52A4PA6NMU1 304 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 PSMD11O00231 422 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 SLC22A2O15244 555 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 CCNT2O60583 730 aaKnown RBP6.33□□□□□ -1.4
CCDC60-205ENST00000546345 PRAMEF11O60813 436 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ATP6V1G1O75348 118 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 CLPTM1O96005 669 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 HNRNPCP07910 306 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCDC60-205ENST00000546345 UMODP07911 640 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 XRCC1P18887 633 aaPredicted RBP6.33□□□□□ -1.4
CCDC60-205ENST00000546345 IVDP26440 423 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 SERPINB3P29508 390 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ADSLP30566 484 aaPredicted RBP6.33□□□□□ -1.4
CCDC60-205ENST00000546345 PTPN7P35236 360 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ADRA1BP35368 520 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 MAGEA4P43358 317 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 GABRB2P47870 512 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 BPIFB4P59827 614 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ADAM8P78325 824 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ACY1Q03154 408 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 TRAF2Q12933 501 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 CBX3Q13185 183 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 PCOLCEQ15113 449 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 CEBPEQ15744 281 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 C3AR1Q16581 482 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 C15orf59Q2T9L4 293 aaPredicted RBP6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ARMC3Q5W041 872 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 FCRL6Q6DN72 434 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 GFRALQ6UXV0 394 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 IZUMO2Q6UXV1 221 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 LARP4Q71RC2 724 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ARCQ7LC44 396 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 DHDDSQ86SQ9 333 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 BIVMQ86UB2 503 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ZNF354CQ86Y25 554 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 UMODL1-AS1Q8N2C9 162 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 CLEC1AQ8NC01 280 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ICA1LQ8NDH6 482 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 RBM15BQ8NDT2 890 aaKnown RBP6.33□□□□□ -1.4
CCDC60-205ENST00000546345 CHDHQ8NE62 594 aaPredicted RBP6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ADAMTS18Q8TE60 1221 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 FAM172AQ8WUF8 416 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 C18orf8Q96DM3 657 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 CNDP1Q96KN2 507 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 AGPAT1Q99943 283 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 TSSK1BQ9BXA7 367 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 TRIM31Q9BZY9 425 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 LIME1Q9H400 295 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 RETREG1Q9H6L5 497 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 MANSC1Q9H8J5 431 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 MAGEE1Q9HCI5 957 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 TAS2R1Q9NYW7 299 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 NINJ2Q9NZG7 142 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 TAGLN3Q9UI15 199 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 MAGEL2Q9UJ55 1249 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 BTRCQ9Y297 605 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ZNF407Q9C0G0 2248 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 ANK2Q01484 3957 aa6.33□□□□□ -1.4
CCDC60-205ENST00000546345 MPDZO75970 2070 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 GOLGA8QA0A0J9YX86 632 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 GOLGA8OA6NCC3 632 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 TLCD2A6NGC4 264 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 OR5K4A6NMS3 321 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 GOLGA8NF8WBI6 632 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 LSM1O15116 133 aaKnown RBP6.32□□□□□ -1.4
CCDC60-205ENST00000546345 SPOPO43791 374 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 ACSL3O95573 720 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 PLATP00750 562 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 SERPINA6P08185 405 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 DHRS4L1P0CG22 281 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 SLC2A4P14672 509 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 AMD1P17707 334 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 CNTFP26441 200 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 FOXN2P32314 431 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 CDH5P33151 784 aaPredicted RBP6.32□□□□□ -1.4
CCDC60-205ENST00000546345 PPARGP37231 505 aaPredicted RBP6.32□□□□□ -1.4
CCDC60-205ENST00000546345 SLCO1A2P46721 670 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 CLCNKAP51800 687 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 ITGA8P53708 1063 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 YBEYP58557 167 aaPredicted RBP6.32□□□□□ -1.4
CCDC60-205ENST00000546345 BCL2L1Q07817 233 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 RIPPLY1Q0D2K3 151 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 KRT81Q14533 505 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 SIX1Q15475 284 aaPredicted RBP6.32□□□□□ -1.4
CCDC60-205ENST00000546345 INAQ16352 499 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 CDO1Q16878 200 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 PARP15Q460N3 678 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 LRRC38Q5VT99 294 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 LRRC66Q68CR7 880 aa6.32□□□□□ -1.4
CCDC60-205ENST00000546345 RPUSD3Q6P087 351 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms