RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 MORN1Q5T089 497 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 SAXO2Q658L1 398 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 TIGD3Q6B0B8 471 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 PLET1Q6UQ28 207 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 PAMR1Q6UXH9 720 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 LIX1LQ8IVB5 337 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 SIX5Q8N196 739 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 ATG10Q9H0Y0 220 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 SH3BP4Q9P0V3 963 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 NUP214P35658 2090 aaPredicted RBP13.61□□□□□ -0.23
SRP54-202ENST00000546080 OR6C75A6NL08 312 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 C12orf71A8MTZ7 269 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 A8MX80 341 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 SYN3O14994 580 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 AP2A2O94973 939 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 GASTP01350 101 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 GPC1P35052 558 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 HNF1BP35680 557 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 LIMS1P48059 325 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 AP1S1P61966 158 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 NKX3-2P78367 333 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 DSC1Q08554 894 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 C1DQ13901 141 aaKnown RBP13.61□□□□□ -0.23
SRP54-202ENST00000546080 ELOAQ14241 798 aaKnown RBP13.61□□□□□ -0.23
SRP54-202ENST00000546080 LCN1P1Q5VSP4 162 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 LIPJQ5W064 366 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 HJURPQ8NCD3 748 aaPredicted RBP13.61□□□□□ -0.23
SRP54-202ENST00000546080 NMNAT1Q9HAN9 279 aaPredicted RBP13.61□□□□□ -0.23
SRP54-202ENST00000546080 DNAJC27Q9NZQ0 273 aa13.61□□□□□ -0.23
SRP54-202ENST00000546080 MGAT4DA6NG13 374 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 SLC38A8A6NNN8 435 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 MYL12BO14950 172 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 SEC14L5O43304 696 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 TPST2O60704 377 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 TRIM3O75382 744 aaPredicted RBP13.6□□□□□ -0.23
SRP54-202ENST00000546080 IL1AP01583 271 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 KLKB1P03952 638 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 ANXA4P09525 319 aaPredicted RBP13.6□□□□□ -0.23
SRP54-202ENST00000546080 IRF1P10914 325 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 CPN2P22792 545 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 GZMKP49863 264 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 ZNF33BQ06732 778 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 RBBP4Q09028 425 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 NCF4Q15080 339 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 GPR19Q15760 415 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 TATDN3Q17R31 274 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 XKR6Q5GH73 641 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.6□□□□□ -0.23
SRP54-202ENST00000546080 DDI2Q5TDH0 399 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 LIPKQ5VXJ0 399 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 ZNF852Q6ZMS4 543 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 LAS2Q8IYD9 372 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 C1orf52Q8N6N3 182 aaKnown RBP13.6□□□□□ -0.23
SRP54-202ENST00000546080 WDR20Q8TBZ3 569 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 CREB3L4Q8TEY5 395 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 DEDD2Q8WXF8 326 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 MSLNLQ96KJ4 702 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 CWH43Q9H720 699 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 NIPAL2Q9H841 368 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 FZD3Q9NPG1 666 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 DIABLOQ9NR28 239 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 GPATCH2Q9NW75 528 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 SPATA6Q9NWH7 488 aaPredicted RBP13.6□□□□□ -0.23
SRP54-202ENST00000546080 ZDHHC3Q9NYG2 299 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 KLHL42Q9P2K6 505 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 RHCGQ9UBD6 479 aa13.6□□□□□ -0.23
SRP54-202ENST00000546080 PRAMEF33A0A0G2JMD5 474 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 LOC105371267A0A1B0GV96 52 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 A0A1W2PQ72 361 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 INPPL1O15357 1258 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 PLA2G10O15496 165 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 PRAMEF10O60809 474 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 SH3BGRLO75368 114 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 TNFRSF21O75509 655 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 HBQ1P09105 142 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 SRCP12931 536 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 CD22P20273 847 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 IDSP22304 550 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 HMGA2P52926 109 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 BCL2L1Q07817 233 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 MLLT11Q13015 90 aaPredicted RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 DUSP4Q13115 394 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 TNK1Q13470 666 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 BTBD16Q32M84 506 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 DPY19L3Q6ZPD9 716 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 TPGS1Q6ZTW0 290 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 ANKS3Q6ZW76 656 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 CAMKMTQ7Z624 323 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 CLDN22Q8N7P3 220 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 ASB11Q8WXH4 323 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 KIAA1143Q96AT1 154 aaPredicted RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 PLD4Q96BZ4 506 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 P2RY13Q9BPV8 354 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 SLC35A5Q9BS91 424 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 TXNL4BQ9NX01 149 aaKnown RBP13.59□□□□□ -0.23
SRP54-202ENST00000546080 ENPP4Q9Y6X5 453 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 C2orf78A6NCI8 922 aa13.59□□□□□ -0.23
SRP54-202ENST00000546080 ARRDC5A6NEK1 342 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms