RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 GOT1P17174 413 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 DESP17661 470 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 UGT1A6P19224 532 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 ELAVL4P26378 380 aaKnown RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 CHRNA7P36544 502 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 KCNJ4P48050 445 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 GLIPR1P48060 266 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 GAS1P54826 345 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 PRMT2P55345 433 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 MAZP56270 477 aaKnown RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 LTBQ06643 244 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TRAP1Q12931 704 aaKnown RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 HERC3Q15034 1050 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 STXBP2Q15833 593 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 GPR33Q49SQ1 333 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TTC27Q6P3X3 843 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 FUT10Q6P4F1 479 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 CTR9Q6PD62 1173 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 ZNF852Q6ZMS4 543 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 BTN2A1Q7KYR7 527 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 ADAMTSL2Q86TH1 951 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 NLRP14Q86W24 1093 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TMEM126BQ8IUX1 230 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 DNAJC22Q8N4W6 341 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 IQCF1Q8N6M8 205 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 LRTM2Q8N967 370 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 CCNYQ8ND76 341 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 SORCS1Q8WY21 1168 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TMEM186Q96B77 213 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TESK2Q96S53 571 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 PRMT1Q99873 361 aaKnown RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 ALKBH7Q9BT30 221 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TRMT61BQ9BVS5 477 aaKnown RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 OR2B2Q9GZK3 357 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 SHARPINQ9H0F6 387 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TSPYL1Q9H0U9 437 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 SDCBP2Q9H190 292 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 C5orf66Q9H5L9 145 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 C10orf88Q9H8K7 445 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 FKRPQ9H9S5 495 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 RAVER2Q9HCJ3 691 aaKnown RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 FGF21Q9NSA1 209 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 FAM207AQ9NSI2 230 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TAS2R3Q9NYW6 316 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 TRIM10Q9UDY6 481 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 BLOC1S6Q9UL45 172 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 FOXA2Q9Y261 457 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-222ENST00000545308 ATP6V0A2Q9Y487 856 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 PAPPA2Q9BXP8 1791 aa3.71□□□□□ -1.82
SNHG1-222ENST00000545308 CUL9Q8IWT3 2517 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 SAA2-SAA4A0A096LPE2 208 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 FAM149AA5PLN7 773 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 ANTXRLA6NF34 631 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 SOCS5O75159 536 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 PRKRAO75569 313 aaKnown RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 PTBP3O95758 552 aaKnown RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 TGFAP01135 160 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 IGHV4-31P0DP07 118 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 GP1BBP13224 206 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 DARSP14868 501 aaKnown RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 EFNA1P20827 205 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 HOXD10P28358 340 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 SFNP31947 248 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 HTD2P86397 168 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 GALK2Q01415 458 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 SP3Q02447 781 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 SLC34A1Q06495 639 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 ABRQ12979 859 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 GAMTQ14353 236 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 GK2Q14410 553 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 ACKR1Q16570 336 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 ZC2HC1CQ53FD0 456 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 UNQ6126/PRO20091Q6UXV3 157 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 TUBA1AQ71U36 451 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 MARK2Q7KZI7 788 aaKnown RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 CPEB2Q7Z5Q1 589 aaKnown RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 ZBTB44Q8NCP5 570 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 GGHQ92820 318 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 RFT1Q96AA3 541 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 RTP4Q96DX8 246 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 NAP1L3Q99457 506 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 TUBA1CQ9BQE3 449 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 PSD2Q9BQI7 771 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 LRRC1Q9BTT6 524 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 ZBTB20Q9HC78 741 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 ZCCHC3Q9NUD5 404 aaKnown RBP3.7□□□□□ -1.82
SNHG1-222ENST00000545308 DONSONQ9NYP3 566 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 TMCC3Q9ULS5 477 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 CLCA3PQ9Y6N3 262 aa3.7□□□□□ -1.82
SNHG1-222ENST00000545308 COL6A3P12111 3177 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 TRIOBPQ9H2D6 2365 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 UBR2Q8IWV8 1755 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 TMEM129A0AVI4 362 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 E5RGE8 158 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 K7EPI3 171 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 O00370 1275 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 SCO2O43819 266 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 GUCA1CO95843 209 aa3.69□□□□□ -1.82
SNHG1-222ENST00000545308 NUDT17P0C025 328 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms