RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 DCLRE1CQ96SD1 692 aaKnown RBP12.34□□□□□ -0.43
PDZD4-209ENST00000544474 ARHGAP39Q9C0H5 1083 aa12.34□□□□□ -0.43
PDZD4-209ENST00000544474 DERL2Q9GZP9 239 aa12.34□□□□□ -0.43
PDZD4-209ENST00000544474 SPNS1Q9H2V7 528 aa12.34□□□□□ -0.43
PDZD4-209ENST00000544474 DCAF13Q9NV06 445 aaKnown RBP12.34□□□□□ -0.43
PDZD4-209ENST00000544474 TMEM184CQ9NVA4 438 aa12.34□□□□□ -0.43
PDZD4-209ENST00000544474 SLC39A1Q9NY26 324 aa12.34□□□□□ -0.43
PDZD4-209ENST00000544474 RIMKLBQ9ULI2 386 aa12.34□□□□□ -0.43
PDZD4-209ENST00000544474 PCDHB5Q9Y5E4 795 aa12.34□□□□□ -0.43
PDZD4-209ENST00000544474 SPEGQ15772 3267 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 BCKDHAP12694 445 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 ALAS2P22557 587 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 MAP2K6P52564 334 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 MAB21L1Q13394 359 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 LAMTOR1Q6IAA8 161 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 ZNF704Q6ZNC4 412 aaPredicted RBP12.33□□□□□ -0.44
PDZD4-209ENST00000544474 IQCF1Q8N6M8 205 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 OR10G2Q8NGC3 310 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 RAET1EQ8TD07 263 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 KAT2AQ92830 837 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 MED8Q96G25 268 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 FOPNLQ96NB1 174 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 NIPSNAP1Q9BPW8 284 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 ABHD16BQ9H3Z7 469 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 RDH8Q9NYR8 311 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 TLR6Q9Y2C9 796 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 LOC105369274A0A096LPK9 316 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 PRAMEF33A0A0G2JMD5 474 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 FFAR2O15552 330 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 GMDSO60547 372 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 PRAMEF10O60809 474 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 WBP4O75554 376 aaKnown RBP12.33□□□□□ -0.44
PDZD4-209ENST00000544474 SCELO95171 688 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 SLC25A14O95258 325 aaPredicted RBP12.33□□□□□ -0.44
PDZD4-209ENST00000544474 ALPPP05187 535 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 S100A6P06703 90 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 OGNP20774 298 aaKnown RBP12.33□□□□□ -0.44
PDZD4-209ENST00000544474 HLA-DMAP28067 261 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 PER3P56645 1201 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 RPA4Q13156 261 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 OR4N4Q8N0Y3 316 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 LGI4Q8N135 537 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 DNAJC5GQ8N7S2 189 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 IGSF8Q969P0 613 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 HYLS1Q96M11 299 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 GHITMQ9H3K2 345 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 COPS3Q9UNS2 423 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 PCDHGB3Q9Y5G1 929 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 CHURC1-FNTBB4DL54 471 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 B4DXG7 233 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 CASKO14936 926 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 SIGLEC5O15389 551 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 SUV39H1O43463 412 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 RPS17P08708 135 aaKnown RBP12.33□□□□□ -0.44
PDZD4-209ENST00000544474 ELNP15502 786 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 GJA1P17302 382 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 DNAJA1P31689 397 aaKnown RBP12.33□□□□□ -0.44
PDZD4-209ENST00000544474 ZNF157P51786 506 aaPredicted RBP12.33□□□□□ -0.44
PDZD4-209ENST00000544474 RPS14P62263 151 aaKnown RBP12.33□□□□□ -0.44
PDZD4-209ENST00000544474 SIGLEC14Q08ET2 396 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 XKR4Q5GH76 650 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 TEX261Q6UWH6 196 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 ZIC5Q96T25 663 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 CINPQ9BW66 212 aaPredicted RBP12.33□□□□□ -0.44
PDZD4-209ENST00000544474 BRINP2Q9C0B6 783 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 SLC52A3Q9NQ40 469 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 ST3GAL5Q9UNP4 418 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 U3KQ87 197 aa12.33□□□□□ -0.44
PDZD4-209ENST00000544474 LTBP3Q9NS15 1303 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 SMAD9O15198 467 aaKnown RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 PEX14O75381 377 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 RHOQP17081 205 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 RAB3AP20336 220 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 PTGER1P34995 402 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 ETV6P41212 452 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 RGRP47804 291 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 GBX2P52951 348 aaPredicted RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 RPS24P62847 133 aaKnown RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 MBTPS1Q14703 1052 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 CRTC2Q53ET0 693 aaPredicted RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 BOLLQ8N9W6 283 aaKnown RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 OR52H1Q8NGJ2 320 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 RACGAP1Q9H0H5 632 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 NANSQ9NR45 359 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 PPIEQ9UNP9 301 aaKnown RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 TRAPPC4Q9Y296 219 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 PRELID3BQ9Y3B1 194 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 SPIN1Q9Y657 262 aaPredicted RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 RFPL3O75679 317 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 FGF18O76093 207 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 CYP17A1P05093 508 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 CRYBB1P53674 252 aaPredicted RBP12.32□□□□□ -0.44
PDZD4-209ENST00000544474 SLC16A1P53985 500 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 GRK1Q15835 563 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 ZNF792Q3KQV3 632 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 IL20RBQ6UXL0 311 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 USP30Q70CQ3 517 aa12.32□□□□□ -0.44
PDZD4-209ENST00000544474 PLEKHH3Q7Z736 793 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms