RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 AGGF1Q8N302 714 aaeCLIP14.36□□□□□ -0.11
CD4-212ENST00000544344 TMEM251Q8N6I4 163 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 SLCO2A1Q92959 643 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 NEIL2Q969S2 332 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 RHBGQ9H310 441 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 ERVK-11Q9UQG0 969 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 MMACHCQ9Y4U1 282 aa14.36□□□□□ -0.11
CD4-212ENST00000544344 JMJD1CQ15652 2540 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 A8MVJ9 347 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 ACOT7O00154 380 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 AQP7O14520 342 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 SOX3P41225 446 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 MAGEA5P43359 124 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 HNRNPFP52597 415 aaKnown RBP14.35□□□□□ -0.11
CD4-212ENST00000544344 TERF1P54274 439 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 FOXO1Q12778 655 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 THOC5Q13769 683 aaKnown RBP14.35□□□□□ -0.11
CD4-212ENST00000544344 DUPD1Q68J44 220 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 LRRC8EQ6NSJ5 796 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 CASC4Q6P4E1 433 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 IL20RBQ6UXL0 311 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 Q71RC1 249 aaPredicted RBP14.35□□□□□ -0.11
CD4-212ENST00000544344 BIVMQ86UB2 503 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 SLC22A16Q86VW1 577 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 TMEM52Q8NDY8 209 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 ARMC2Q8NEN0 867 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 WFDC11Q8NEX6 87 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 RASL10BQ96S79 203 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 NDNQ99608 321 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 CNPPD1Q9BV87 410 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 PNO1Q9NRX1 252 aaKnown RBP14.35□□□□□ -0.11
CD4-212ENST00000544344 HPF1Q9NWY4 346 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 MYOTQ9UBF9 498 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 FBXO5Q9UKT4 447 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 MPDZO75970 2070 aa14.35□□□□□ -0.11
CD4-212ENST00000544344 A6NNC1 897 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 PSMD12O00232 456 aaPredicted RBP14.34□□□□□ -0.11
CD4-212ENST00000544344 ZNF354AO60765 605 aaPredicted RBP14.34□□□□□ -0.11
CD4-212ENST00000544344 ZFAND5O76080 213 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 ENDOUP21128 410 aaKnown RBP14.34□□□□□ -0.11
CD4-212ENST00000544344 REEP5Q00765 189 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 HYAL4Q2M3T9 481 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 ZNF750Q32MQ0 723 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 C1orf185Q5T7R7 199 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 NDUFAF5Q5TEU4 345 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 UGT3A1Q6NUS8 523 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 PAQR3Q6TCH7 311 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 PAMR1Q6UXH9 720 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 GSTA5Q7RTV2 222 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 FAM109AQ8N4B1 249 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 ASB15Q8WXK1 588 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 SCYL1Q96KG9 808 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 IL1RL2Q9HB29 575 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 DMRT3Q9NQL9 472 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 TRMT6Q9UJA5 497 aaKnown RBP14.34□□□□□ -0.11
CD4-212ENST00000544344 CBLCQ9ULV8 474 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 NCKAP5O14513 1909 aa14.34□□□□□ -0.11
CD4-212ENST00000544344 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.33□□□□□ -0.12
CD4-212ENST00000544344 MAGEB16A2A368 324 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 SYT5O00445 386 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 SUSD5O60279 629 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 WDR1O75083 606 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 ATE1O95260 518 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 CNR1P21554 472 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 DGKQP52824 942 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 RUNX2Q13950 521 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 TRIP13Q15645 432 aaPredicted RBP14.33□□□□□ -0.12
CD4-212ENST00000544344 RIPPLY2Q5TAB7 128 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 HECTD2Q5U5R9 776 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 SEM1Q6ZVN7 128 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 WDR53Q7Z5U6 358 aaPredicted RBP14.33□□□□□ -0.12
CD4-212ENST00000544344 CAMKMTQ7Z624 323 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 KRTAP1-3Q8IUG1 177 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 RNF10Q8N5U6 811 aaKnown RBP14.33□□□□□ -0.12
CD4-212ENST00000544344 RELL2Q8NC24 303 aaPredicted RBP14.33□□□□□ -0.12
CD4-212ENST00000544344 SLC5A11Q8WWX8 675 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 BAG1Q99933 345 aaPredicted RBP14.33□□□□□ -0.12
CD4-212ENST00000544344 SH3GL2Q99962 352 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 FAM173AQ9BQD7 235 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 SEMA4BQ9NPR2 832 aaPredicted RBP14.33□□□□□ -0.12
CD4-212ENST00000544344 C20orf96Q9NUD7 363 aaPredicted RBP14.33□□□□□ -0.12
CD4-212ENST00000544344 SAMD15Q9P1V8 674 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 SPRR3Q9UBC9 169 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 ZKSCAN5Q9Y2L8 839 aa14.33□□□□□ -0.12
CD4-212ENST00000544344 SDR42E2A6NKP2 422 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 WWP2O00308 870 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 SERPINA6P08185 405 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 MLNP12872 115 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 GABRB3P28472 473 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 HOXC12P31275 282 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 RGS4P49798 205 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 ZNF75DP51815 510 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 CDKN2DP55273 166 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 HSD17B7P56937 341 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 CSHL1Q14406 222 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 FLYWCH1Q4VC44 716 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 TOR1AIP1Q5JTV8 583 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 RBM20Q5T481 1227 aaKnown RBP14.32□□□□□ -0.12
CD4-212ENST00000544344 GK5Q6ZS86 529 aa14.32□□□□□ -0.12
CD4-212ENST00000544344 PALM2Q8IXS6 379 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms