RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 GAL3ST4Q96RP7 486 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 CPVLQ9H3G5 476 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 SIX2Q9NPC8 291 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 PDRG1Q9NUG6 133 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 KCNK6Q9Y257 313 aa3.34□□□□□ -1.88
SCFD1-207ENST00000544052 ADAMTSL1Q8N6G6 1762 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 PCNTO95613 3336 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 A0A087X0K7 114 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 A0A1B0GUV1 79 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 GTPBP10A4D1E9 387 aaKnown RBP3.33□□□□□ -1.88
SCFD1-207ENST00000544052 C2CD4DB7Z1M9 353 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 NPIPA3F8WFD2 350 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 CACNB4O00305 520 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-207ENST00000544052 DFFBO76075 338 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 ATP1B1P05026 303 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 FGF3P11487 239 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-207ENST00000544052 CA6P23280 308 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 GLIPR1P48060 266 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 ERVFC1-1P60608 527 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 P2RY6Q15077 328 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 MAPK11Q15759 364 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 CNSTQ6PJW8 725 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 GDPD4Q6W3E5 623 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 SLC16A9Q7RTY1 509 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 TRPT1Q86TN4 253 aaKnown RBP3.33□□□□□ -1.88
SCFD1-207ENST00000544052 LAX1Q8IWV1 398 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 PSMA8Q8TAA3 256 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 TSSK2Q96PF2 358 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 BTBD9Q96Q07 612 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 UBQLN3Q9H347 655 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 C5orf66Q9H5L9 145 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 OR6C2Q9NZP2 312 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 ODF2LQ9ULJ1 636 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 AGTPBP1Q9UPW5 1226 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF510Q9Y2H8 683 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 PPP2R2CQ9Y2T4 447 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 TMED7Q9Y3B3 224 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 COL4A1P02462 1669 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 WDR81Q562E7 1941 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 LTBP1Q14766 1721 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 CEMIPQ8WUJ3 1361 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 NPC1L1Q9UHC9 1359 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 COL4A5P29400 1685 aa3.33□□□□□ -1.88
SCFD1-207ENST00000544052 IGHV4-61A0A0C4DH41 118 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 MTMR11A4FU01 709 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 C19orf81C9J6K1 198 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 IGHV4-59P01825 116 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 GAP43P17677 238 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 SRD5A2P31213 254 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 CETN2P41208 172 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 CASP9P55211 416 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 LINC01547P58512 204 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 CDR2Q01850 454 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 CETN1Q12798 172 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 PDE7AQ13946 482 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 RBBP5Q15291 538 aaKnown RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 PARP10Q53GL7 1025 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 XKR6Q5GH73 641 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 CCNYL2Q5T2Q4 361 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 AGAP6Q5VW22 663 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 TMEM207Q6UWW9 146 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 SLC26A9Q7LBE3 791 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 SMIM29Q86T20 159 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 TMEM126BQ8IUX1 230 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 ZC3H3Q8IXZ2 948 aaKnown RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 KIRREL3Q8IZU9 778 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 RFLNBQ8N5W9 214 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 OR4C15Q8NGM1 316 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 NXPE2Q96DL1 559 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 LGALS12Q96DT0 336 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF560Q96MR9 790 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 RUNDC3BQ96NL0 473 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 CDCA3Q99618 268 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 THAP2Q9H0W7 228 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 C10orf88Q9H8K7 445 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 GPR173Q9NS66 373 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 EXOC6BQ9Y2D4 811 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 SNED1Q8TER0 1413 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 DDX60Q8IY21 1712 aaKnown RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 SCN5AQ14524 2016 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 IGKV2D-30A0A075B6S6 120 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 O00370 1275 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 ACOT8O14734 319 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 GPIP06744 558 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 PCP11498 1178 aaKnown RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 UGT1A6P19224 532 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 CLK1P49759 484 aaKnown RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 CLDN17P56750 224 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 SLC34A1Q06495 639 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 FAM76BQ5HYJ3 339 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 LCN1P1Q5VSP4 162 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 ETFRF1Q6IPR1 90 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 PRUNE1Q86TP1 453 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 CCDC60Q8IWA6 550 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 RCOR2Q8IZ40 523 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 STPG4Q8N801 248 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 GBP7Q8N8V2 638 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 TM9SF4Q92544 642 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 NEDD4LQ96PU5 975 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 DDX50Q9BQ39 737 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms