RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SMIM10L1P0DMW3 83 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 KITP10721 976 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 IL10P22301 178 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 HIST1H1TP22492 207 aaPredicted RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 F8A1P23610 371 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ATP5A1P25705 553 aaKnown RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 BUD31P41223 144 aaPredicted RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 TSFMP43897 325 aaKnown RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 GCGRP47871 477 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 RPL14P50914 215 aaKnown RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 RAB38P57729 211 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 FOXL2P58012 376 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 HMGCS1Q01581 520 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 TLE3Q04726 772 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ZNF33BQ06732 778 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 KLC1Q07866 573 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ACTN3Q08043 901 aaPredicted RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 ACSM2AQ08AH3 577 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 GALNT1Q10472 559 aaPredicted RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 BST1Q10588 318 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 NR6A1Q15406 480 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 PDCD2Q16342 344 aaPredicted RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 NKG7Q16617 165 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ADPRMQ3LIE5 342 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 GALNTL6Q49A17 601 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 SPIN4Q56A73 249 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 CCNYL2Q5T2Q4 361 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 FAM69BQ5VUD6 431 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 FAM219BQ5XKK7 198 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 KANK2Q63ZY3 851 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ACSM2BQ68CK6 577 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 MRPL14Q6P1L8 145 aaKnown RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 C19orf48Q6RUI8 117 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 COX15Q7KZN9 410 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 CRLF3Q8IUI8 442 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 KIRREL3Q8IZU9 778 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 CA13Q8N1Q1 262 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ARHGEF39Q8N4T4 335 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 C1orf52Q8N6N3 182 aaKnown RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 ZNF781Q8N8C0 355 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 AMER3Q8N944 861 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ACOT4Q8N9L9 421 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 FAM47BQ8NA70 645 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 OR2Y1Q8NGV0 311 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 RAB3IL1Q8TBN0 382 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ADAMTS18Q8TE60 1221 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 TWIST2Q8WVJ9 160 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ZNF75CPQ92670 426 aaPredicted RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 TBC1D20Q96BZ9 403 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 SMIM10Q96HG1 83 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 SLC45A3Q96JT2 553 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 PPP1R36Q96LQ0 422 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 NPLQ9BXD5 320 aaPredicted RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 MRPL1Q9BYD6 325 aaKnown RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 FAM117AQ9C073 453 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 AICDAQ9GZX7 198 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 WDR54Q9H977 334 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 CLK4Q9HAZ1 481 aaKnown RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 PRDM7Q9NQW5 492 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 RIC8BQ9NVN3 520 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 THAP1Q9NVV9 213 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 LYARQ9NX58 379 aaKnown RBP5.97□□□□□ -1.45
LTBR-212ENST00000543542 PSD3Q9NYI0 1048 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 ZDHHC2Q9UIJ5 367 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 PHF11Q9UIL8 331 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 C3orf18Q9UK00 162 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 RAP2CQ9Y3L5 183 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 PCDHGA6Q9Y5G7 932 aa5.97□□□□□ -1.45
LTBR-212ENST00000543542 FRYQ5TBA9 3013 aa5.96□□□□□ -1.45
LTBR-212ENST00000543542 SPTBP11277 2137 aa5.96□□□□□ -1.45
LTBR-212ENST00000543542 NUP210LQ5VU65 1888 aa5.96□□□□□ -1.45
LTBR-212ENST00000543542 A0A087WV48 116 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 IDSB3KWA1 339 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 FAM227AF5H4B4 570 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 CLDN4O14493 209 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 PIP5K1BO14986 540 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 NKX2-8O15522 239 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 PCDH7O60245 1069 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 PRMT3O60678 531 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 DNAJB6O75190 326 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 EEDO75530 441 aaKnown RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 JRKO75564 520 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 BMP10O95393 424 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 TBX6O95947 436 aaPredicted RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 CAPNS1P04632 268 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 FGF4P08620 206 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 FAM58BPP0C7Q3 252 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 C8orf89P0DMQ9 161 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 ALDH9A1P49189 494 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 ARFIP1P53367 373 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 MAPK12P53778 367 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 LIM2P55344 173 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 SNRPNP63162 240 aaKnown RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 EEF1A2Q05639 463 aaKnown RBP5.96□□□□□ -1.46
LTBR-212ENST00000543542 VAC14Q08AM6 782 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 CDC20Q12834 499 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 STX4Q12846 297 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 SLC13A2Q13183 592 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 RUNX2Q13950 521 aa5.96□□□□□ -1.46
LTBR-212ENST00000543542 SSPNQ14714 243 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms