RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 FBXO43Q4G163 708 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 ZNF765Q7L2R6 523 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 RTL10Q7L3V2 364 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 TRMT11Q7Z4G4 463 aaKnown RBP12.9□□□□□ -0.34
PPME1-208ENST00000543525 RNF130Q86XS8 419 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 ARMC8Q8IUR7 673 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 OR52J3Q8NH60 311 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 NUS1Q96E22 293 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 CRELD1Q96HD1 420 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 ZNF514Q96K75 400 aaPredicted RBP12.9□□□□□ -0.34
PPME1-208ENST00000543525 DACH2Q96NX9 599 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 PSD2Q9BQI7 771 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 NEURL2Q9BR09 285 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 BTBD2Q9BX70 525 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 IMPAD1Q9NX62 359 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 DUSP12Q9UNI6 340 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 TSC22D4Q9Y3Q8 395 aa12.9□□□□□ -0.34
PPME1-208ENST00000543525 KRBA1A5PL33 1030 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 TMEM247A6NEH6 219 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 M0R082 166 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 ZSCAN9O15535 394 aaPredicted RBP12.9□□□□□ -0.35
PPME1-208ENST00000543525 LILRB5O75023 590 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 CCNB2O95067 398 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 UQCRC2P22695 453 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 LIPAP38571 399 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 GPR1P46091 355 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 IDH2P48735 452 aaKnown RBP12.9□□□□□ -0.35
PPME1-208ENST00000543525 DGKGP49619 791 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 TAP2Q03519 686 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 CBX3Q13185 183 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 SYT16Q17RD7 645 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 USP43Q70EL4 1123 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 LRRC56Q8IYG6 542 aaPredicted RBP12.9□□□□□ -0.35
PPME1-208ENST00000543525 KRT78Q8N1N4 520 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 STX19Q8N4C7 294 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 VN1R2Q8NFZ6 395 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 UTP15Q8TED0 518 aaKnown RBP12.9□□□□□ -0.35
PPME1-208ENST00000543525 PROX1Q92786 737 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 PPP1R16AQ96I34 528 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 COL21A1Q96P44 957 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 RAD9AQ99638 391 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 NLNQ9BYT8 704 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 MMP27Q9H306 513 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 DSN1Q9H410 356 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 ARMC7Q9H6L4 198 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 RLIMQ9NVW2 624 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 ZNF226Q9NYT6 803 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 AHSPQ9NZD4 102 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 GULP1Q9UBP9 304 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 ACSL6Q9UKU0 697 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 PNMA8BQ9ULN7 279 aaPredicted RBP12.9□□□□□ -0.35
PPME1-208ENST00000543525 HCN4Q9Y3Q4 1203 aa12.9□□□□□ -0.35
PPME1-208ENST00000543525 NUP214P35658 2090 aaPredicted RBP12.89□□□□□ -0.35
PPME1-208ENST00000543525 C17orf113A0A1B0GUU1 675 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 SERPINB7O75635 380 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 C21orf33P30042 268 aaPredicted RBP12.89□□□□□ -0.35
PPME1-208ENST00000543525 XCR1P46094 333 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 PPP5CP53041 499 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 EIF4HQ15056 248 aaKnown RBP12.89□□□□□ -0.35
PPME1-208ENST00000543525 SLC5A12Q1EHB4 618 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 MPEG1Q2M385 716 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 RAET1GQ6H3X3 334 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 TUBA3EQ6PEY2 450 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 SLC46A3Q7Z3Q1 461 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 TRIM74Q86UV6 250 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 CCDC103Q8IW40 242 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 ZNF366Q8N895 744 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 KIAA1958Q8N8K9 716 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 LINC00615Q96LM1 132 aaPredicted RBP12.89□□□□□ -0.35
PPME1-208ENST00000543525 NIPSNAP1Q9BPW8 284 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 MAPKAP1Q9BPZ7 522 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 DPEP2Q9H4A9 486 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 TRIM39Q9HCM9 518 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 MIEF1Q9NQG6 463 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.89□□□□□ -0.35
PPME1-208ENST00000543525 IRAK3Q9Y616 596 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 ENPP4Q9Y6X5 453 aa12.89□□□□□ -0.35
PPME1-208ENST00000543525 TRBC2A0A5B9 178 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 POP7O75817 140 aaKnown RBP12.88□□□□□ -0.35
PPME1-208ENST00000543525 KLHL18O94889 574 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 GADD45GO95257 159 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 SOD1P00441 154 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 TIMP1P01033 207 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 RPLP0P05388 317 aaKnown RBP12.88□□□□□ -0.35
PPME1-208ENST00000543525 RB1P06400 928 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 IL3P08700 152 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 GABRB1P18505 474 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 RHCEP18577 417 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 CD40LGP29965 261 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 HMGA2P52926 109 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 PCBP3P57721 371 aaKnown RBP12.88□□□□□ -0.35
PPME1-208ENST00000543525 ERVFC1P60507 584 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 CDC42P60953 191 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 DSTNP60981 165 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 MEF2AQ02078 507 aaPredicted RBP12.88□□□□□ -0.35
PPME1-208ENST00000543525 DHCR24Q15392 516 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 ZNF404Q494X3 552 aa12.88□□□□□ -0.35
PPME1-208ENST00000543525 PRAMEF14Q5SWL7 426 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms