RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 OR4C11Q6IEV9 310 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 ZNF793Q6ZN11 406 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 SHISA6Q6ZSJ9 500 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 TMEM151BQ8IW70 566 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 HOMEZQ8IX15 550 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 PRSS58Q8IYP2 241 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 SHISA5Q8N114 240 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 CA13Q8N1Q1 262 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 GBP7Q8N8V2 638 aaPredicted RBP16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 PEX11GQ96HA9 241 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 OR1F2PQ96R84 312 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 NMRK1Q9NWW6 199 aa16.17■□□□□ 0.18
RABGGTA-203ENST00000543002 TMEM114B3SHH9 223 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 AZIN1O14977 448 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 RNH1P13489 461 aaKnown RBP16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 BGNP21810 368 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 SERPINB3P29508 390 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 SSR2P43308 183 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 CDC20Q12834 499 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 ABRAXAS2Q15018 415 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 CLEC6AQ6EIG7 209 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 ATG14Q6ZNE5 492 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 LAPTM4BQ86VI4 370 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 ACOT4Q8N9L9 421 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 ADAMTS17Q8TE56 1095 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 TBC1D20Q96BZ9 403 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 HBEGFQ99075 208 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 CRB3Q9BUF7 120 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 SORBS1Q9BX66 1292 aaKnown RBP16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 ZNF717Q9BY31 904 aaPredicted RBP16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 PRORYQ9H606 182 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 DDX31Q9H8H2 851 aaKnown RBP16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 AHSPQ9NZD4 102 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 SLC12A4Q9UP95 1085 aa16.16■□□□□ 0.18
RABGGTA-203ENST00000543002 CCDC88CQ9P219 2028 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 EPG5Q9HCE0 2579 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 CDC14CA4D256 554 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 ATP8B1O43520 1251 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 ITM2AO43736 263 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 JRKO75564 520 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 IGHEP01854 428 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 FURINP09958 794 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 PRKAR1AP10644 381 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 BSGP35613 385 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 ABCE1P61221 599 aaKnown RBP16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 STX3Q13277 289 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 KANK2Q63ZY3 851 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 C19orf48Q6RUI8 117 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 SCIMPQ6UWF3 145 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 MED25Q71SY5 747 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 RAB43Q86YS6 212 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 CLYBLQ8N0X4 340 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 METTL4Q8N3J2 472 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 ZCCHC7Q8N3Z6 543 aaKnown RBP16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 NACC2Q96BF6 587 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 CRELD1Q96HD1 420 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 MRPL1Q9BYD6 325 aaKnown RBP16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 ACPTQ9BZG2 426 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 LYRM4Q9HD34 91 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 LANCL2Q9NS86 450 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 SEMA3GQ9NS98 782 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 VPS29Q9UBQ0 182 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 C3orf18Q9UK00 162 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 MKL2Q9ULH7 1088 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 DAPP1Q9UN19 280 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 TRAF6Q9Y4K3 522 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 PKD1L2Q7Z442 2459 aa16.15■□□□□ 0.18
RABGGTA-203ENST00000543002 DSPP15924 2871 aaKnown RBP16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 IDSB3KWA1 339 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 PSMD12O00232 456 aaPredicted RBP16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 SNUPNO95149 360 aaKnown RBP16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 HSPA4LO95757 839 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 FHP07954 510 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 CYC1P08574 325 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 CHN1P15882 459 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 JAK1P23458 1154 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 MMP11P24347 488 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 OTX2P32243 289 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 SLC1A6P48664 564 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 EMP2P54851 167 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 LIM2P55344 173 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 RAB38P57729 211 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 PPP2R2AP63151 447 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 TBL3Q12788 808 aaKnown RBP16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 COL28A1Q2UY09 1125 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 TUBB8Q3ZCM7 444 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 SH2D4BQ5SQS7 431 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 ATP1A1-AS1Q5TC04 95 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 RNF165Q6ZSG1 346 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 TRIM46Q7Z4K8 759 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 NUDT13Q86X67 352 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 TRIM42Q8IWZ5 723 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 ADAMTS18Q8TE60 1221 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 THAP4Q8WY91 577 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 RBCK1Q9BYM8 510 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 VN1R1Q9GZP7 353 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 KCMF1Q9P0J7 381 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 ZDHHC2Q9UIJ5 367 aa16.14■□□□□ 0.17
RABGGTA-203ENST00000543002 CFAP47Q6ZTR5 3102 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 A0A0A6YYD5 115 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms