RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 DEC1Q9P2X7 70 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ANGPT4Q9Y264 503 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 POFUT2Q9Y2G5 429 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 PCDHGA6Q9Y5G7 932 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 NUP214P35658 2090 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 PRRC2BQ5JSZ5 2229 aaKnown RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 A0A1W2PRB8 838 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ARRDC5A6NEK1 342 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 C1QTNF3-AMACRE9PGA6 284 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 PCDHGA12O60330 932 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 FOXD2O60548 495 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 MMP20O60882 483 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 RPN2P04844 631 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 GSTM5P46439 218 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 MLLT10P55197 1068 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 MESP2Q0VG99 397 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 NFE2L1Q14494 772 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ZNF234Q14588 700 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ANKDD1AQ495B1 522 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 PSRC1Q6PGN9 363 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ANGPTL8Q6UXH0 198 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 DSG4Q86SJ6 1040 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ZNF605Q86T29 641 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 SLC9B2Q86UD5 537 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ARMC8Q8IUR7 673 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 CXorf40AQ8TE69 158 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 CIDECQ96AQ7 238 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 SERINC2Q96SA4 455 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 PITHD1Q9GZP4 211 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 SPATA7Q9P0W8 599 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ENOPH1Q9UHY7 261 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ASF1AQ9Y294 204 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 DNMT3AQ9Y6K1 912 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 OR2A25A4D2G3 310 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 LINC01553A4QN01 128 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 CLDN24A6NM45 220 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ZBTB11O95625 1053 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 KLK1P06870 262 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 IL3P08700 152 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 UQCRC2P22695 453 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 CXCR2P25025 360 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 TPP2P29144 1249 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 GRK3P35626 688 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 CHI3L1P36222 383 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 MAP2K4P45985 399 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 XCR1P46094 333 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 LIMS1P48059 325 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 PRIM2P49643 509 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 HMGA2P52926 109 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 MC1RQ01726 317 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 OCA2Q04671 838 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 TSTA3Q13630 321 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ZNF846Q147U1 533 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 TBCEQ15813 527 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 SLC5A12Q1EHB4 618 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 MICAQ29983 383 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 TMEM240Q5SV17 173 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ZNF697Q5TEC3 545 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 FAM83HQ6ZRV2 1179 aaPredicted RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 DEPDC4Q8N2C3 294 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 SLC15A4Q8N697 577 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 NFKBIDQ8NI38 313 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 CHPT1Q8WUD6 406 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 S100ZQ8WXG8 99 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 MYOCQ99972 504 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 WDR12Q9GZL7 423 aaKnown RBP6.26□□□□□ -1.41
PTPRO-208ENST00000542557 PCBD2Q9H0N5 130 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 NT5DC2Q9H857 520 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 WASH6PQ9NQA3 447 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 FKBP14Q9NWM8 211 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 SPASTQ9UBP0 616 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 ACSL6Q9UKU0 697 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 RNF6Q9Y252 685 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 TESMINQ9Y4I5 508 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 PCDHGA2Q9Y5H1 932 aa6.26□□□□□ -1.41
PTPRO-208ENST00000542557 CLDN25C9JDP6 229 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 SAP18O00422 153 aaKnown RBP6.25□□□□□ -1.41
PTPRO-208ENST00000542557 OPN1SWP03999 348 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 GBAP04062 536 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 NDUFV2P19404 249 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 DDCP20711 480 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 SLC6A11P48066 632 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 DSTNP60981 165 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 HTRA3P83110 453 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 REEP5Q00765 189 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 SPIBQ01892 262 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 FPGSQ05932 587 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 SMN1Q16637 294 aaKnown RBP6.25□□□□□ -1.41
PTPRO-208ENST00000542557 ADPRMQ3LIE5 342 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 C16orf87Q6PH81 154 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 AMZ2Q86W34 360 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 C17orf64Q86WR6 236 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 RNF130Q86XS8 419 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 P3H2Q8IVL5 708 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 LGI4Q8N135 537 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 SLC5A8Q8N695 610 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 ZNF740Q8NDX6 193 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 OR5K2Q8NHB8 316 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 DNASE1L2Q92874 299 aa6.25□□□□□ -1.41
PTPRO-208ENST00000542557 SH3YL1Q96HL8 342 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms