RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 IKZF3Q9UKT9 509 aa10□□□□□ -0.81
CHFR-219ENST00000541341 CYP8B1Q9UNU6 501 aa10□□□□□ -0.81
CHFR-219ENST00000541341 WASF3Q9UPY6 502 aa10□□□□□ -0.81
CHFR-219ENST00000541341 PADI2Q9Y2J8 665 aa10□□□□□ -0.81
CHFR-219ENST00000541341 SAMHD1Q9Y3Z3 626 aaKnown RBP10□□□□□ -0.81
CHFR-219ENST00000541341 POLR3HQ9Y535 204 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 SCN8AQ9UQD0 1980 aa10□□□□□ -0.81
CHFR-219ENST00000541341 MUC22E2RYF6 1773 aaPredicted RBP10□□□□□ -0.81
CHFR-219ENST00000541341 DMXL2Q8TDJ6 3036 aa10□□□□□ -0.81
CHFR-219ENST00000541341 PLXNA2O75051 1894 aa10□□□□□ -0.81
CHFR-219ENST00000541341 SLC35F4A4IF30 521 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 NPEPPSL1A6NEC2 478 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 PSMD11O00231 422 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CACNB4O00305 520 aaPredicted RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 RFXANKO14593 260 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 FFAR2O15552 330 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CLDN9O95484 217 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 FADS2O95864 444 aaKnown RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 ADH1CP00326 375 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CEACAM1P13688 526 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 HOXB2P14652 356 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 GPX2P18283 190 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 GABRG2P18507 467 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 TACR2P21452 398 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 FUT4P22083 530 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 MAOBP27338 520 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 KDELR2P33947 212 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 IL12RB1P42701 662 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 HTR3AP46098 478 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 ASMTP46597 345 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 HNMTP50135 292 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 RORCP51449 518 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 ARSDP51689 593 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 ERVPABLB-1P60509 514 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 RPL38P63173 70 aaKnown RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 RPP38P78345 283 aaKnown RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 SIM1P81133 766 aaPredicted RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 TIAL1Q01085 375 aaKnown RBP eCLIP9.99□□□□□ -0.81
CHFR-219ENST00000541341 IFITM3Q01628 133 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 RBBP4Q09028 425 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CAMK2GQ13555 558 aaPredicted RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 GTF2H3Q13889 308 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 C1DQ13901 141 aaKnown RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 DGCR6Q14129 220 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 MAPK11Q15759 364 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 DUOXA1Q1HG43 343 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 VMACQ2NL98 169 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 EOGTQ5NDL2 527 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 LYSMD4Q5XG99 296 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 MZT2BQ6NZ67 158 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 ZNF517Q6ZMY9 492 aaPredicted RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 TPGS1Q6ZTW0 290 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 RPS27LQ71UM5 84 aaKnown RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 METTL3Q86U44 580 aaKnown RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 CCDC190Q86UF4 302 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CACUL1Q86Y37 369 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 DENND1CQ8IV53 801 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CHPFQ8IZ52 775 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 RBFAQ8N0V3 343 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 GDPD1Q8N9F7 314 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 IL17RDQ8NFM7 739 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 OR4F6Q8NGB9 312 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 OR2T11Q8NH01 316 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CNIH3Q8TBE1 160 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 ZNF675Q8TD23 568 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 ZCCHC14Q8WYQ9 949 aaKnown RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 HTRA1Q92743 480 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 RPL3LQ92901 407 aaKnown RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 USP7Q93009 1102 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CXorf40BQ96DE9 158 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 TEX37Q96LM6 180 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CINPQ9BW66 212 aaPredicted RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 TMEM121BQ9BXQ6 578 aaPredicted RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 CD244Q9BZW8 370 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 REXO4Q9GZR2 422 aaKnown RBP9.99□□□□□ -0.81
CHFR-219ENST00000541341 CLPBQ9H078 707 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 IMPAD1Q9NX62 359 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 QPCTLQ9NXS2 382 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 PTTG3PQ9NZH4 202 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 KLHL21Q9UJP4 597 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 HCN2Q9UL51 889 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 SNX7Q9UNH6 387 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 ITM2BQ9Y287 266 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 V9GYQ6 96 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CEP295Q9C0D2 2601 aa9.99□□□□□ -0.81
CHFR-219ENST00000541341 CCDC182A6NF36 153 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 SNTNA6NMZ2 147 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 NOTOA8MTQ0 251 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 MYO1GB0I1T2 1018 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 WASH3PC4AMC7 463 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 NEDD8-MDP1E9PL57 170 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 E9PQ18 207 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 CDC7O00311 574 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 CCRL2O00421 344 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 TOR1BO14657 336 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 KPNA5O15131 536 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 INSIG1O15503 277 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 SUV39H1O43463 412 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 PROM1O43490 865 aa9.98□□□□□ -0.81
CHFR-219ENST00000541341 UGDHO60701 494 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms