RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SCLYQ96I15 445 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 NMNAT1Q9HAN9 279 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 KLHL20Q9Y2M5 609 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 TMEM98Q9Y2Y6 226 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 EYSQ5T1H1 3165 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 A0A0B4J293 547 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 TSPAN6O43657 245 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 APOA1P02647 267 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZNF8P17098 575 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 S100A1P23297 94 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 CA8P35219 290 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 LIMK1P53667 647 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 LIM2P55344 173 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZFP69Q49AA0 526 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZNF517Q6ZMY9 492 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 LINC00299Q6ZSB3 139 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 ELMOD1Q8N336 334 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 TBC1D20Q96BZ9 403 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 RNF31Q96EP0 1072 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 ACAT2Q9BWD1 397 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 FAM120CQ9NX05 1096 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 PADI2Q9Y2J8 665 aa9.92□□□□□ -0.82
CDC42SE1-207ENST00000540998 RTCAO00442 366 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 INPPL1O15357 1258 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 GREM1O60565 184 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 GADD45GO95257 159 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 CYP17A1P05093 508 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 HBQ1P09105 142 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR56A5P0C7T3 313 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 ACLYP53396 1101 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 IFI44LQ53G44 452 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 ERICH5Q6P6B1 374 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 AGTRAPQ6RW13 159 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 ARMCX6Q7L4S7 300 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 HSD11B1LQ7Z5J1 315 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 GALNT12Q8IXK2 581 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 UBQLNLQ8IYU4 475 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 HJURPQ8NCD3 748 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 SOCS4Q8WXH5 440 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 FCGR1BQ92637 280 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 AP3M1Q9Y2T2 418 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 YIPF1Q9Y548 306 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 SNX11Q9Y5W9 270 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 PEX16Q9Y5Y5 336 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 V9GYH0 126 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 TRAV19A0A0A6YYK7 116 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 TRBC2A0A5B9 178 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 EFCAB10A6NFE3 127 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 WASHC1A8K0Z3 465 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 H3BN98 237 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 SGTAO43765 313 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 NME6O75414 186 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 CCNB2O95067 398 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 ATP1B2P14415 290 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 CHI3L1P36222 383 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 SNRPD2P62316 118 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 INSL4Q14641 139 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 PUM1Q14671 1186 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 WASH2PQ6VEQ5 465 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 DNAJB7Q7Z6W7 309 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 TAGAPQ8N103 731 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 CAMKK1Q8N5S9 505 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 DCAF4L2Q8NA75 395 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR9Q1Q8NGQ5 310 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 UCN3Q969E3 161 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 SLC6A18Q96N87 628 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 PHOX2BQ99453 314 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 TMEM39AQ9NV64 488 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 TMEM161AQ9NX61 479 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 CCRL2O00421 344 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 ADAMDEC1O15204 470 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 CSO75390 466 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 STATHP02808 62 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 CKMP06732 381 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 SERPINA4P29622 427 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 PCGF2P35227 344 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 SOX6P35712 828 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 RAB25P57735 213 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 CSTF3Q12996 717 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 GPR50Q13585 617 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 VEZF1Q14119 521 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 GGTA1PQ4G0N0 100 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 IFNL1Q8IU54 200 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 DEPDC7Q96QD5 511 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 C2orf49Q9BVC5 232 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 PRR14Q9BWN1 585 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZNF556Q9HAH1 456 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 SPATA6Q9NWH7 488 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 TOR4AQ9NXH8 423 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 CCDC59Q9P031 241 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 STOX2Q9P2F5 926 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 LRFN2Q9ULH4 789 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 RUVBL1Q9Y265 456 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 ITM2BQ9Y287 266 aa9.91□□□□□ -0.82
CDC42SE1-207ENST00000540998 PRRG1O14668 218 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 TNFRSF21O75509 655 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 CDRT1O95170 752 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 IL7P13232 177 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 TNNI3P19429 210 aa9.9□□□□□ -0.82
CDC42SE1-207ENST00000540998 CD79BP40259 229 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms