RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SLCO1C1Q9NYB5 712 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 KLHL8Q9P2G9 620 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 MKL2Q9ULH7 1088 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 NCKAP1Q9Y2A7 1128 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 KCNK7Q9Y2U2 307 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 PCDHGA6Q9Y5G7 932 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 BPTFQ12830 3046 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 TRBV23-1A0A0A0MS06 115 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 PRAMEF33A0A0G2JMD5 474 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 FAM170BA6NMN3 283 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 MYO1GB0I1T2 1018 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 GTPBP1O00178 669 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 KCNK1O00180 336 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 GABRDO14764 452 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 SELENOFO60613 162 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 PRAMEF10O60809 474 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 C9P02748 559 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 GALTP07902 379 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC2A2P11168 524 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 GOT1P17174 413 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 APEX1P27695 318 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC11A1P49279 550 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 TKTL1P51854 596 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 ATXN1P54253 815 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 ST3GAL4Q11206 333 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 NPRL3Q12980 569 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 DOC2BQ14184 412 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 ATP6AP1LQ52LC2 224 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 TMEM240Q5SV17 173 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC27A4Q6P1M0 643 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 TMEM107Q6UX40 140 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 GCNT7Q6ZNI0 430 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 UNC93AQ86WB7 457 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 TMEM173Q86WV6 379 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 OR2T4Q8NH00 348 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 OR6S1Q8NH40 331 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 NSMAFQ92636 917 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 KIAA1143Q96AT1 154 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 ARL5BQ96KC2 179 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC28A3Q9HAS3 691 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 PRDM9Q9NQV7 894 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 BIN3Q9NQY0 253 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 DCAF13Q9NV06 445 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 MED9Q9NWA0 146 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 HCN3Q9P1Z3 774 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 NEUROG3Q9Y4Z2 214 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 CDH10Q9Y6N8 788 aa9.1□□□□□ -0.95
CTNNA1-243ENST00000540387 DPYSL4O14531 572 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 LALBAP00709 142 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 CYP17A1P05093 508 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 ANXA3P12429 323 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 PAMP19021 973 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MRPL19P49406 292 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 CRYZQ08257 329 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 SWI5Q1ZZU3 235 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 NHLRC3Q5JS37 347 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MANEALQ5VSG8 457 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MLIPQ5VWP3 458 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 SYPL2Q5VXT5 272 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 Q6ZPB1 254 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 PAQR7Q86WK9 346 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 ZFAND4Q86XD8 727 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 UCN3Q969E3 161 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF689Q96CS4 500 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 NXPE2Q96DL1 559 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MRPL48Q96GC5 212 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 ZBTB18Q99592 522 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 CINPQ9BW66 212 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 BRINP2Q9C0B6 783 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 ALG9Q9H6U8 611 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 PDP1Q9P0J1 537 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 PURGQ9UJV8 347 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 PADI2Q9Y2J8 665 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 PDCD11Q14690 1871 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 LAMA3Q16787 3333 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 ELOVL7A1L3X0 281 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 LRRC14BA6NHZ5 514 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 M0QZQ0 153 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 M0R233 179 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 EFCAB14O75071 495 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 OR4F21O95013 312 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 SCELO95171 688 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 SERPINA1P01009 418 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 APOC3P02656 99 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 PRR35P0CG20 571 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 HK1P19367 917 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 WARSP23381 471 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MAPK1P28482 360 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 NNMTP40261 264 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 GSTM5P46439 218 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 AGFG1P52594 562 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 POU4F1Q01851 419 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MXD1Q05195 221 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 FGL1Q08830 312 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 RIPPLY1Q0D2K3 151 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MPEG1Q2M385 716 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 KCTD11Q693B1 232 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 OR4F3Q6IEY1 312 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 KANSL1Q7Z3B3 1105 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 LUZP2Q86TE4 346 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms