RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SLC5A8Q8N695 610 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 OR7G3Q8NG95 312 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 OR4M2Q8NGB6 313 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 AKR7LQ8NHP1 331 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 LURAP1Q96LR2 239 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 ULBP1Q9BZM6 244 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 KDM3BQ7LBC6 1761 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FAM72CH0Y354 149 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 LINC01387J3KSC0 135 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 XKP51811 444 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 IRF3Q14653 427 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FAM72AQ5TYM5 149 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FAM72DQ6L9T8 149 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FAM72BQ86X60 149 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 NFKBIDQ8NI38 313 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 MEGF10Q96KG7 1140 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 PPP3R2Q96LZ3 170 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FBXL18Q96ME1 805 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FEVQ99581 238 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 SPOCK3Q9BQ16 436 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 PLEKHA6Q9Y2H5 1048 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FMO6PO60774 539 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 KCNJ5P48544 419 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 EFNA5P52803 228 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 AP3S2P59780 193 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 POLR2GP62487 172 aaKnown RBP eCLIP10.68□□□□□ -0.7
PBX1-212ENST00000540236 LRFN4Q6PJG9 635 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 NEIL3Q8TAT5 605 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 CNDP2Q96KP4 475 aaKnown RBP10.68□□□□□ -0.7
PBX1-212ENST00000540236 BBS4Q96RK4 519 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 SEMA3GQ9NS98 782 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FZD4Q9ULV1 537 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 LTN1O94822 1766 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 PRRG1O14668 218 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FPR1P21462 350 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 RYKP34925 604 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 WNT3AP56704 352 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 RPS25P62851 125 aaKnown RBP10.68□□□□□ -0.7
PBX1-212ENST00000540236 INCA1Q0VD86 236 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 CAPSQ13938 189 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FAM76BQ5HYJ3 339 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 SFRP5Q5T4F7 317 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 ZSWIM9Q86XI8 627 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 MIB1Q86YT6 1006 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 LHFPL5Q8TAF8 219 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 GPRC5BQ9NZH0 403 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FER1L4A9Z1Z3 1794 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 PPP3R1P63098 170 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 FOXM1Q08050 763 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 ABRAXAS2Q15018 415 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 AVPI1Q5T686 147 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 ARL9Q6T311 187 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 LRP11Q86VZ4 500 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 OR8D4Q8NGM9 314 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 DPF3Q92784 378 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 FKBP10Q96AY3 582 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 SECISBP2Q96T21 854 aaKnown RBP10.67□□□□□ -0.7
PBX1-212ENST00000540236 HAPLN2Q9GZV7 340 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 ABCG4Q9H172 646 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 TDP1Q9NUW8 608 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 VAPAQ9P0L0 249 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 C13orf42A0A1B0GVH6 325 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 B4GALT4O60513 344 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 B3GALT4O96024 378 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 GBAP04062 536 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 MRPL3P09001 348 aaKnown RBP10.67□□□□□ -0.7
PBX1-212ENST00000540236 LIPCP11150 499 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 PTPRAP18433 802 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 PCMT1P22061 227 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 HEPACAMQ14CZ8 416 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 KANK2Q63ZY3 851 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 PLEKHH3Q7Z736 793 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 OR10Z1Q8NGY1 313 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 SETD6Q8TBK2 473 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 TCRBV5S2A0A599 114 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 ZNF705GA8MUZ8 300 aaPredicted RBP10.67□□□□□ -0.7
PBX1-212ENST00000540236 B2MP61769 119 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 SLC35F1Q5T1Q4 408 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 PELI3Q8N2H9 469 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 DPP10Q8N608 796 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 OR4F6Q8NGB9 312 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 ARL5BQ96KC2 179 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 SMPD4Q9NXE4 827 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 FLVCR2Q9UPI3 526 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 FKBP7Q9Y680 259 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 GLYATL1P3A0A0U1RQE8 302 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 LRRTM2O43300 516 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 RASGRP1O95267 797 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 SNRNP70P08621 437 aaKnown RBP10.67□□□□□ -0.7
PBX1-212ENST00000540236 PITX1P78337 314 aaPredicted RBP10.67□□□□□ -0.7
PBX1-212ENST00000540236 LARP4Q71RC2 724 aaKnown RBP eCLIP10.67□□□□□ -0.7
PBX1-212ENST00000540236 SERPINA12Q8IW75 414 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 OR4L1Q8NH43 312 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 GSTO2Q9H4Y5 243 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 KLHL21Q9UJP4 597 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 ZNF223Q9UK11 482 aaPredicted RBP10.67□□□□□ -0.7
PBX1-212ENST00000540236 MAGEB17A8MXT2 336 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 FAM227AF5H4B4 570 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 STX16O14662 325 aa10.67□□□□□ -0.7
PBX1-212ENST00000540236 ADRB1P08588 477 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms