RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 TMEM131LA2VDJ0 1609 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ZNF726A6NNF4 738 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 SDHDO14521 159 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 TREHO43280 583 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 VNN1O95497 513 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ZNF30P17039 623 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 CD34P28906 385 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 MAN2A2P49641 1150 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 GALEQ14376 348 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 C11orf91Q3C1V1 193 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 PRAMEF14Q5SWL7 426 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 TMEM220Q6QAJ8 160 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 THOC6Q86W42 341 aaKnown RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 JAGN1Q8N5M9 183 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 NLGN2Q8NFZ4 835 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 SH3YL1Q96HL8 342 aaPredicted RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 CDC6Q99741 560 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 SLC5A7Q9GZV3 580 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 REEP4Q9H6H4 257 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 DNAJC27Q9NZQ0 273 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 TNFRSF10BO14763 440 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 LCMT2O60294 686 aaKnown RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 HLA-DQB2P05538 268 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 CHATP28329 748 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 PITPNBP48739 271 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ART1P52961 327 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 LASP1Q14847 261 aaKnown RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 PLEKHS1Q5SXH7 462 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 TREML1Q86YW5 311 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 PLD6Q8N2A8 252 aaKnown RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 POGLUT1Q8NBL1 392 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 CDKN2AIPNLQ96HQ2 116 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ZNF649Q9BS31 505 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 SDHAF3Q9NRP4 125 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 GRHPRQ9UBQ7 328 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 SIX4Q9UIU6 781 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 LOC100509620A0A075B734 347 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 UNC119BA6NIH7 251 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 BPNT1O95861 308 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 MPC1LP0DKB6 136 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 TYRP14679 529 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 TAS2R50P59544 299 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ZNF763Q0D2J5 394 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 CHRFAM7AQ494W8 412 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 BLOC1S3Q6QNY0 202 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 METAP1DQ6UB28 335 aaPredicted RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 ARHGAP12Q8IWW6 846 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 PSMG2Q969U7 264 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 SECISBP2Q96T21 854 aaKnown RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 BCO2Q9BYV7 579 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 EVA1AQ9H8M9 152 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ACSL6Q9UKU0 697 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 OARD1Q9Y530 152 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 NPIPA5E9PKD4 350 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 NFATC1O95644 943 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ADAP00813 363 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ALPPL2P10696 532 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 HOXC12P31275 282 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 DGKQP52824 942 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ZNF169Q14929 603 aaPredicted RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 OR52E8Q6IFG1 317 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 GPC2Q8N158 579 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 CFAP52Q8N1V2 620 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 FTMTQ8N4E7 242 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 TP63Q9H3D4 680 aaPredicted RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 NPIPA1Q9UND3 350 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 IGLV3-22A0A075B6J6 115 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 PSMD9O00233 223 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 EPOP01588 193 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 APODP05090 189 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ETV1P50549 477 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 GINS1Q14691 196 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 EXOC3L2Q2M3D2 409 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 LIPKQ5VXJ0 399 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 KCTD18Q6PI47 426 aaPredicted RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 LINC00299Q6ZSB3 139 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 SLC22A15Q8IZD6 547 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 C1orf52Q8N6N3 182 aaKnown RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 CAMKVQ8NCB2 501 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 CERKQ8TCT0 537 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 ACDQ96AP0 544 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 SIGLEC10Q96LC7 697 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 URM1Q9BTM9 101 aaKnown RBP6.68□□□□□ -1.34
SORT1-209ENST00000538502 C19orf12Q9NSK7 152 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 PCDHB11Q9Y5F2 797 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 CACNG2Q9Y698 323 aa6.68□□□□□ -1.34
SORT1-209ENST00000538502 SCDO00767 359 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 RETP07949 1114 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 CHRM5P08912 532 aaPredicted RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 CSF1P09603 554 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 LEPRP48357 1165 aaKnown RBP6.67□□□□□ -1.34
SORT1-209ENST00000538502 CAMLGP49069 296 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 STC1P52823 247 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 PEA15Q15121 130 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 DHCR24Q15392 516 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 TECRLQ5HYJ1 363 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 KRBOX4Q5JUW0 171 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 PRAMEF18Q5VWM3 479 aa6.67□□□□□ -1.34
SORT1-209ENST00000538502 CEACAM19Q7Z692 300 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms