RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 HSD3B1P14060 373 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 HSD3B2P26439 372 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 SERPINB1P30740 379 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 TGFBR2P37173 567 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 HNRNPFP52597 415 aaKnown RBP12.32□□□□□ -0.44
TRIM25-202ENST00000537230 HNRNPA1L2Q32P51 320 aaKnown RBP12.32□□□□□ -0.44
TRIM25-202ENST00000537230 SPIN4Q56A73 249 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 COLEC12Q5KU26 742 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 C11orf96Q7Z7L8 435 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 ADGRD2Q7Z7M1 963 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 MMAAQ8IVH4 418 aaKnown RBP12.32□□□□□ -0.44
TRIM25-202ENST00000537230 NRSN1Q8IZ57 195 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 ZNF784Q8NCA9 323 aaPredicted RBP12.32□□□□□ -0.44
TRIM25-202ENST00000537230 DCSTAMPQ9H295 470 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 DMRT3Q9NQL9 472 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 SLC9A3R1O14745 358 aaPredicted RBP12.32□□□□□ -0.44
TRIM25-202ENST00000537230 SNRNP200O75643 2136 aaKnown RBP12.32□□□□□ -0.44
TRIM25-202ENST00000537230 PRNPP04156 253 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 ITGB7P26010 798 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 GRK3P35626 688 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 LIPAP38571 399 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 CRATP43155 626 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 OR1E2P47887 323 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 ZNF33BQ06732 778 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 KEAP1Q14145 624 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 MAD2L1BPQ15013 274 aaPredicted RBP12.32□□□□□ -0.44
TRIM25-202ENST00000537230 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 DEPDC1Q5TB30 811 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 HORMAD1Q86X24 394 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 OR5AR1Q8NGP9 310 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 SGPP1Q9BX95 441 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 TRIM39Q9HCM9 518 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 THUMPD1Q9NXG2 353 aaKnown RBP12.32□□□□□ -0.44
TRIM25-202ENST00000537230 SLC23A2Q9UGH3 650 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 BTNL2Q9UIR0 455 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 OSGIN1Q9UJX0 560 aa12.32□□□□□ -0.44
TRIM25-202ENST00000537230 KIF26AQ9ULI4 1882 aaPredicted RBP12.32□□□□□ -0.44
TRIM25-202ENST00000537230 CKAP5Q14008 2032 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 HOXC11O43248 304 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 LZTS3O60299 673 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 PCDHGA12O60330 932 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 DNAJA1P31689 397 aaKnown RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ASMTP46597 345 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 PCYT1AP49585 367 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 CLK1P49759 484 aaKnown RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ARHGDIAP52565 204 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ZNF234Q14588 700 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 SF3B4Q15427 424 aaKnown RBP eCLIP12.31□□□□□ -0.441e-6■■■■■ 30.6
TRIM25-202ENST00000537230 BCL7AQ4VC05 210 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ERICH5Q6P6B1 374 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 VN1R5Q7Z5H4 357 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 CAMKMTQ7Z624 323 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 FAM124AQ86V42 546 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 LYSMD2Q8IV50 215 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 Q8N9G6 341 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ATG16L2Q8NAA4 619 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 OR9A1PQ8NGU1 263 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 APOL4Q9BPW4 351 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ZDHHC5Q9C0B5 715 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 C6orf62Q9GZU0 229 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 GABARAPL1Q9H0R8 117 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 AMBNQ9NP70 447 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 RPS6KA6Q9UK32 745 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 NDRG4Q9ULP0 352 aaKnown RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 SLC27A6Q9Y2P4 619 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 NUP210Q8TEM1 1887 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 MUC22E2RYF6 1773 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 PRAMEF25A6NGN4 478 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 PSMD11O00231 422 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 WBP4O75554 376 aaKnown RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ADH1CP00326 375 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 KLK1P06870 262 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 HNRNPA1P09651 372 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 C1GALT1C1LP0DN25 315 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 FPR1P21462 350 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ACADLP28330 430 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 C21orf33P30042 268 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 TAS2R50P59544 299 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 CXCR4P61073 352 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ZNF763Q0D2J5 394 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 FOXD4Q12950 439 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 VEZF1Q14119 521 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 STEAP3Q658P3 488 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 UTS2BQ765I0 119 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 POC5Q8NA72 575 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 HCAR2Q8TDS4 363 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 LGR4Q9BXB1 951 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 OR2A25A4D2G3 310 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 UPK1BO75841 260 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 C6orf183Q5T699 404 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ATAD3BQ5T9A4 648 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 SVOPQ8N4V2 548 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 FAM83FQ8NEG4 500 aaPredicted RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 SMG7Q92540 1137 aaKnown RBP12.31□□□□□ -0.44
TRIM25-202ENST00000537230 EPHX3Q9H6B9 360 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 REEP4Q9H6H4 257 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 ITM2CQ9NQX7 267 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 KIF17Q9P2E2 1029 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 HCN2Q9UL51 889 aa12.31□□□□□ -0.44
TRIM25-202ENST00000537230 SPEGQ15772 3267 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms