RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CDC14AQ9UNH5 594 aa6.67□□□□□ -1.34
YBX3-206ENST00000536823 SH2B3Q9UQQ2 575 aa6.67□□□□□ -1.34
YBX3-206ENST00000536823 HS3ST3B1Q9Y662 390 aa6.67□□□□□ -1.34
YBX3-206ENST00000536823 ICE1Q9Y2F5 2266 aa6.67□□□□□ -1.34
YBX3-206ENST00000536823 CENPEQ02224 2701 aa6.67□□□□□ -1.34
YBX3-206ENST00000536823 DIDO1Q9BTC0 2240 aaKnown RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 SCN3AQ9NY46 2000 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 ESYT3A0FGR9 886 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 NPEPPSL1A6NEC2 478 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 FAM159BA6NKW6 160 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 MASP2O00187 686 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 TBX1O43435 398 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 FOXS1O43638 330 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 KLHL41O60662 606 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 IPO13O94829 963 aaKnown RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 SORBS2O94875 1100 aaKnown RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 ALPPP05187 535 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 SCG5P05408 212 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 HIST1H2AGP0C0S8 130 aaPredicted RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 HIST1H2ADP20671 130 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 BCL6P41182 706 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 KCNC1P48547 511 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 HMGA2P52926 109 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 TAS2R39P59534 338 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 CSNK1G2P78368 415 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 CAV1Q03135 178 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 OCA2Q04671 838 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 CKAP4Q07065 602 aaKnown RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 KLC1Q07866 573 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 AIMP2Q13155 320 aaKnown RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 RAPSNQ13702 412 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 FAM53BQ14153 422 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 ZNF460Q14592 562 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 NDUFA9Q16795 377 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 PPP1R3AQ16821 1122 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 TUBB8Q3ZCM7 444 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 NADK2Q4G0N4 442 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 CAPN13Q6MZZ7 669 aaPredicted RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 KIRREL2Q6UWL6 708 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 SBSNQ6UWP8 590 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 TMEM207Q6UWW9 146 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 SHISA6Q6ZSJ9 500 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 ADAMTSL2Q86TH1 951 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 PRSS58Q8IYP2 241 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 NKAPQ8N5F7 415 aaKnown RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 RBMXL3Q8N7X1 1067 aaKnown RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 AMER3Q8N944 861 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 ABHD11Q8NFV4 315 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 OR11G2Q8NGC1 345 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 ANKRD7Q92527 254 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 KISS1RQ969F8 398 aaPredicted RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 MIB2Q96AX9 1013 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 MIEF2Q96C03 454 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 VPS39Q96JC1 886 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 VPS50Q96JG6 964 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 HIST1H2AHQ96KK5 128 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 HIST1H2AJQ99878 128 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 H2AFJQ9BTM1 129 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 TRIM54Q9BYV2 358 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 FAM129AQ9BZQ8 928 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 RAB17Q9H0T7 212 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 ATG10Q9H0Y0 220 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 POPDC3Q9HBV1 291 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 MKKSQ9NPJ1 570 aaPredicted RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 SMYD2Q9NRG4 433 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 ARL15Q9NXU5 204 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 TRPC4Q9UBN4 977 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 C3orf18Q9UK00 162 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 IKZF3Q9UKT9 509 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 MRPS2Q9Y399 296 aaKnown RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 UTP11Q9Y3A2 253 aaKnown RBP6.66□□□□□ -1.34
YBX3-206ENST00000536823 SCN2AQ99250 2005 aa6.66□□□□□ -1.34
YBX3-206ENST00000536823 KCNE1BA0A087WTH5 132 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 A0A0A6YYC8 382 aaPredicted RBP6.65□□□□□ -1.34
YBX3-206ENST00000536823 A0A1W2PQ72 361 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 TCRBV9S1A1TA0A576 114 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 NOTOA8MTQ0 251 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 CXorf49A8MYA2 514 aaPredicted RBP6.65□□□□□ -1.34
YBX3-206ENST00000536823 IDSB3KWA1 339 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 I3L1I5 382 aaPredicted RBP6.65□□□□□ -1.34
YBX3-206ENST00000536823 CDC7O00311 574 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 MAP2K7O14733 419 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 PCDH17O14917 1159 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 ALOX12BO75342 701 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 PIAS1O75925 651 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 WISP3O95389 354 aaPredicted RBP6.65□□□□□ -1.34
YBX3-206ENST00000536823 NSA2O95478 260 aaKnown RBP6.65□□□□□ -1.34
YBX3-206ENST00000536823 GUCA1CO95843 209 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 HPP00738 406 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 STATHP02808 62 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 ANXA5P08758 320 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 GSTA2P09210 222 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 NPPBP16860 134 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 SAT1P21673 171 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 ITGA3P26006 1051 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 SSTR1P30872 391 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 HOXC12P31275 282 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 GRK3P35626 688 aa6.65□□□□□ -1.34
YBX3-206ENST00000536823 GP5P40197 560 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms