RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PRTFDC1Q9NRG1 225 aa18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PPIEQ9UNP9 301 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1B-204ENST00000536782 A0A0G2JN53 185 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 LRIT2A6NDA9 550 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 NCF1BA6NI72 391 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 NCF1CA8MVU1 366 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 B3GALT2O43825 422 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PEX1O43933 1283 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ITGA10O75578 1167 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 NCF1P14598 390 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 HNRNPH1P31943 449 aaKnown RBP18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 HPDP32754 393 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PTGER1P34995 402 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 RAB38P57729 211 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 FGD2Q7Z6J4 655 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SEC16BQ96JE7 1060 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 DMRTA2Q96SC8 542 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CCDC77Q9BR77 488 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TRIM31Q9BZY9 425 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PITHD1Q9GZP4 211 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 RHOJQ9H4E5 214 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 NT5DC2Q9H857 520 aa18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 MRPS33Q9Y291 106 aaKnown RBP18.35■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ANKDD1BA6NHY2 528 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ADAM10O14672 748 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CLEC3AO75596 197 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PTGS2P35354 604 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 RFC3P40938 356 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 KIR3DL1P43629 444 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SLC12A2P55011 1212 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ILF2Q12905 390 aaKnown RBP18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 SLC13A2Q13183 592 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 FASTKD3Q14CZ7 662 aaKnown RBP18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 TGFBIQ15582 683 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 CREG2Q8IUH2 290 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ZNF295-AS1Q8N0V1 137 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 OR2L5Q8NG80 312 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 C16orf52Q8NHV5 167 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 NCLNQ969V3 563 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 DERL2Q9GZP9 239 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 GPRC5BQ9NZH0 403 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 ZNF223Q9UK11 482 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 PPT2Q9UMR5 302 aa18.34■□□□□ 0.53
TNFRSF1B-204ENST00000536782 MTORP42345 2549 aa18.33■□□□□ 0.53
TNFRSF1B-204ENST00000536782 A0A1B0GTH9 108 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 EFCAB8A8MWE9 144 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 E7ESA3 106 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TP73O15350 636 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 HS6ST1O60243 411 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SSTR2P30874 369 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SSR4P51571 173 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 GPR143P51810 404 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PLA2G16P53816 162 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TRIM40Q6P9F5 258 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 MDGA2Q7Z553 956 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ZNF595Q8IYB9 648 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ZBED8Q8IZ13 594 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TCAIMQ8N3R3 496 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 FAM47BQ8NA70 645 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 FAM57AQ8TBR7 257 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CA5BP1Q8WTZ4 195 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SDCCAG3Q96C92 435 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 QRFPRQ96P65 431 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SPOCK3Q9BQ16 436 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 MCMBPQ9BTE3 642 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 REXO4Q9GZR2 422 aaKnown RBP18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CNOT10Q9H9A5 744 aaKnown RBP18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ADAP2Q9NPF8 381 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TIMMDC1Q9NPL8 285 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 WWOXQ9NZC7 414 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 COQ3Q9NZJ6 369 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 YARS2Q9Y2Z4 477 aaKnown RBP18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CLDN16Q9Y5I7 305 aa18.33■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SPG11Q96JI7 2443 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SYNDIG1LA6NDD5 238 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TGFBR3LH3BV60 316 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CCDC188H7C350 402 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CLGNO14967 610 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CDC40O60508 579 aaKnown RBP eCLIP18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ZFAND5O76080 213 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TPOP07202 933 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TFEBP19484 476 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PPP2R1BP30154 601 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 HNRNPFP52597 415 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 GPR85P60893 370 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 POU4F1Q01851 419 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 RCN2Q14257 317 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ADPRMQ3LIE5 342 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CD163Q86VB7 1156 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TMEM132CQ8N3T6 1108 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ZFP62Q8NB50 900 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TMEM52Q8NDY8 209 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SERINC2Q96SA4 455 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TMEM79Q9BSE2 394 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 EHD1Q9H4M9 534 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 COPS7BQ9H9Q2 264 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 DNAJC11Q9NVH1 559 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 KCMF1Q9P0J7 381 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ERVK-11Q9UQG0 969 aa18.32■□□□□ 0.52
TNFRSF1B-204ENST00000536782 MTO1Q9Y2Z2 717 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms