RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SLC25A25Q6KCM7 469 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PAQR6Q6TCH4 344 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 FAM198BQ6UWH4 519 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 LINC00299Q6ZSB3 139 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ANKRD33Q7Z3H0 272 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 LRRC17Q8N6Y2 441 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 C12orf29Q8N999 325 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 DNAAF3Q8N9W5 541 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 OR10A6Q8NH74 314 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 HMGB4Q8WW32 186 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 GTF3AQ92664 365 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 SLC25A28Q96A46 364 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 MRPS24Q96EL2 167 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 RBM18Q96H35 190 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 C10orf90Q96M02 699 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 SFXN2Q96NB2 322 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 GUCD1Q96NT3 240 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ACCSQ96QU6 501 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 TMEM175Q9BSA9 504 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 NTPCRQ9BSD7 190 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 MED18Q9BUE0 208 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 CCDC32Q9BV29 185 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PTDSS2Q9BVG9 487 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 COL25A1Q9BXS0 654 aaPredicted RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 NUSAP1Q9BXS6 441 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 TRIM54Q9BYV2 358 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 TMEM39BQ9GZU3 492 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 MED28Q9H204 178 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ACAD9Q9H845 621 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ACTR8Q9H981 624 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 CRTAC1Q9NQ79 661 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ASAH2Q9NR71 780 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 RPS6KA6Q9UK32 745 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 STAP1Q9ULZ2 295 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 OR10H1Q9Y4A9 318 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PIAS3Q9Y6X2 628 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PIKFYVEQ9Y2I7 2098 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 A0A1B0GTQ1 180 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 LRIT2A6NDA9 550 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 M0R233 179 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SOX1O00570 391 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 STX16O14662 325 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PRRG1O14668 218 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 LDLRAD4O15165 306 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SLC22A2O15244 555 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 IPO13O94829 963 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 APOL3O95236 402 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 IFNA7P01567 189 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ALDOBP05062 364 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CRYBA1P05813 215 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 APOA4P06727 396 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SUPT20HL2P0C7V6 817 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 C6P13671 934 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MUC1P15941 1255 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 NFYBP25208 207 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ATP5A1P25705 553 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 PRDX3P30048 256 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 HOXA9P31269 272 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SPRP35270 261 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 AKR1C3P42330 323 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MAPKAPK2P49137 400 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SELENOPP49908 381 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 STAT5BP51692 787 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 TKTL1P51854 596 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CYP24A1Q07973 514 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 POU4F2Q12837 409 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CHAF1BQ13112 559 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PIGHQ14442 188 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 MXD4Q14582 209 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 INSL4Q14641 139 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 GANABQ14697 944 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 GRIN2CQ14957 1233 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 EMC2Q15006 297 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RAB30Q15771 203 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SSX1Q16384 188 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 GUCA2BQ16661 112 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 HADHQ16836 314 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 FAM187BQ17R55 369 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 DUOXA1Q1HG43 343 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 C4orf46Q504U0 113 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ANKRD39Q53RE8 183 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PRAMEF13Q5VWM6 474 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 KDM4DQ6B0I6 523 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RGS7BPQ6MZT1 257 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 ZNF613Q6PF04 617 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 WASH2PQ6VEQ5 465 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 TMEM179Q6ZVK1 233 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 USP45Q70EL2 814 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SSX9Q7RTT3 188 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 BCDIN3DQ7Z5W3 292 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 DPPA2Q7Z7J5 298 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PSTKQ8IV42 348 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 SYNPOQ8N3V7 929 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 OXR1Q8N573 874 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ZNF614Q8N883 585 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 TTC29Q8NA56 475 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 TMEM145Q8NBT3 493 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CCNYQ8ND76 341 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 KBTBD8Q8NFY9 601 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MOSPD2Q8NHP6 518 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms