RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ATXN7O15265 892 aaPredicted RBP16.84■□□□□ 0.29
DDX55-204ENST00000536079 MLYCDO95822 493 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 PRB1P04280 392 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 ARRB2P32121 409 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 BSGP35613 385 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 CCL11P51671 97 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 MTTPP55157 894 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 LIM2P55344 173 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 DCAF10Q5QP82 559 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 OR4C11Q6IEV9 310 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 SCIMPQ6UWF3 145 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 ZCCHC23Q6ZST2 131 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 CHSY3Q70JA7 882 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 ACOT4Q8N9L9 421 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 REPS1Q96D71 796 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 PKNOX2Q96KN3 472 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 KCNC2Q96PR1 638 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 OR1F2PQ96R84 312 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 SERINC2Q96SA4 455 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 TBCDQ9BTW9 1192 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 MID1IP1Q9NPA3 183 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 NECTIN3Q9NQS3 549 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 SENP1Q9P0U3 644 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 CLDN16Q9Y5I7 305 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 MED13Q9UHV7 2174 aa16.84■□□□□ 0.29
DDX55-204ENST00000536079 LOC102723996A0A087X1L8 192 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 TGFBR3LH3BV60 316 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 CYR61O00622 381 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 B3GALT2O43825 422 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 TMPRSS11DO60235 418 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 TRIM13O60858 407 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 SCELO95171 688 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 ESRRBO95718 433 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 IGHEP01854 428 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 GBAP04062 536 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 PDGFAP04085 211 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 CELA2AP08217 269 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 COX6A1P12074 109 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 RNH1P13489 461 aaKnown RBP16.83■□□□□ 0.28
DDX55-204ENST00000536079 NR1D1P20393 614 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 MAOAP21397 527 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 HIST1H1TP22492 207 aaPredicted RBP16.83■□□□□ 0.28
DDX55-204ENST00000536079 PTX3P26022 381 aaPredicted RBP16.83■□□□□ 0.28
DDX55-204ENST00000536079 SERPINB3P29508 390 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 RAB38P57729 211 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 IFT88Q13099 833 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 CUL3Q13618 768 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 RAPSNQ13702 412 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 FAM47BQ8NA70 645 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 UCN3Q969E3 161 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 RGMAQ96B86 450 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 ARHGAP9Q9BRR9 750 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 NPLQ9BXD5 320 aaPredicted RBP16.83■□□□□ 0.28
DDX55-204ENST00000536079 ELOVL6Q9H5J4 265 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 CLK4Q9HAZ1 481 aaKnown RBP16.83■□□□□ 0.28
DDX55-204ENST00000536079 PSD3Q9NYI0 1048 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 DAPP1Q9UN19 280 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 BSNQ9UPA5 3926 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 BOD1L1Q8NFC6 3051 aa16.83■□□□□ 0.28
DDX55-204ENST00000536079 IGHV1-45A0A0A0MS14 117 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 MYOCOSA0A1B0GUC4 107 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 PEX12O00623 359 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 CHRNGP07510 517 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 BPGMP07738 259 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 C8orf89P0DMQ9 161 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 ACPPP15309 386 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 SSR2P43308 183 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 PKNOX1P55347 436 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 KCNAB2Q13303 367 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 ABRAXAS2Q15018 415 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 PCOLCEQ15113 449 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 AP5B1Q2VPB7 878 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 TUBB8Q3ZCM7 444 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 CFAP157Q5JU67 520 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 NIPAL1Q6NVV3 410 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 MED25Q71SY5 747 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 ANKRD37Q7Z713 158 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 PLPP5Q8NEB5 264 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 OR6Y1Q8NGX8 325 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 METTL6Q8TCB7 284 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 SELENOMQ8WWX9 145 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 ARL8AQ96BM9 186 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 TLCD1Q96CP7 247 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 ABHD17AQ96GS6 310 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 WDR77Q9BQA1 342 aaPredicted RBP16.82■□□□□ 0.28
DDX55-204ENST00000536079 MRPL1Q9BYD6 325 aaKnown RBP16.82■□□□□ 0.28
DDX55-204ENST00000536079 SLC29A3Q9BZD2 475 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 ZNF160Q9HCG1 818 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 SSU72Q9NP77 194 aaKnown RBP16.82■□□□□ 0.28
DDX55-204ENST00000536079 PPT2Q9UMR5 302 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 SNX6Q9UNH7 406 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 PIEZO2Q9H5I5 2752 aa16.82■□□□□ 0.28
DDX55-204ENST00000536079 ATRXP46100 2492 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 IGKV3D-11A0A0A0MRZ8 115 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 A0A0A6YYD5 115 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 A0A1W2PQ72 361 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 WDR91A4D1P6 747 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 WASHC1A8K0Z3 465 aa16.81■□□□□ 0.28
DDX55-204ENST00000536079 PRKRAO75569 313 aaKnown RBP16.81■□□□□ 0.28
DDX55-204ENST00000536079 CEACAM4O75871 244 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms