RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 GTF2H3Q13889 308 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 LAPTM4AQ15012 233 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 TEAD4Q15561 434 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 OR4D1Q15615 310 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 GCNT7Q6ZNI0 430 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 ZER1Q7Z7L7 766 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 RNF113BQ8IZP6 322 aaKnown RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 PCNPQ8WW12 178 aaKnown RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 PGAP3Q96FM1 320 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-214ENST00000530886 CXorf58Q96LI9 332 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 SLC38A3Q99624 504 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 PTDSS2Q9BVG9 487 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 TMPRSS13Q9BYE2 586 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 FZD8Q9H461 694 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF222Q9UK12 451 aa7.81□□□□□ -1.16
CSDE1-214ENST00000530886 NLRC5Q86WI3 1866 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 A0A0U1RQF3 1178 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 LOC285095A0A1B0GVY8 99 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 FAM74A7A6NL05 159 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 STK25O00506 426 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 HTR3BO95264 441 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 RASGRP1O95267 797 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CBX7O95931 251 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 FCER2P06734 321 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 G6PDP11413 515 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 JUPP14923 745 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SPI1P17947 270 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ITGB8P26012 769 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 BTCP35070 178 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SPAM1P38567 509 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 NNMTP40261 264 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 RFC3P40938 356 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CAPZA2P47755 286 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 STK19P49842 368 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SCAPQ12770 1279 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CDH18Q13634 790 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 GPR176Q14439 515 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 TSNQ15631 228 aaKnown RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SNAPC1Q16533 368 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 FAM74A3Q4VXF1 159 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CNIH2Q6PI25 160 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 FAM198BQ6UWH4 519 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SERPINA11Q86U17 422 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CILP2Q8IUL8 1156 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 TCEAL3Q969E4 200 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 MTERF3Q96E29 417 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 TRMT2BQ96GJ1 504 aaKnown RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 MYOCQ99972 504 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CCM2Q9BSQ5 444 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 C1QTNF6Q9BXI9 259 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 MINDY3Q9H8M7 445 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 JPH1Q9HDC5 661 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SLC2A6Q9UGQ3 507 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 COL4A5P29400 1685 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 MYO1GB0I1T2 1018 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 GTPBP1O00178 669 aaKnown RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 GPR171O14626 319 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 HPGDSO60760 199 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SCN2BO60939 215 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CSO75390 466 aaKnown RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ANXA9O76027 345 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ACAA1P09110 424 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 WARSP23381 471 aaKnown RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SSTR2P30874 369 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 HOXA6P31267 233 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 GDI2P50395 445 aaKnown RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 MAPKAPK3Q16644 382 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 GPR153Q6NV75 609 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 BEND4Q6ZU67 534 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CBLL1Q75N03 491 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 UNC93AQ86WB7 457 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CDAN1Q8IWY9 1227 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 IPMKQ8NFU5 416 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 OR6C4Q8NGE1 309 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ELP5Q8TE02 316 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SFT2D1Q8WV19 159 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 OTUB1Q96FW1 271 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF382Q96SR6 550 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 NT5C1AQ9BXI3 368 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 NKX6-2Q9C056 277 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 PDGFDQ9GZP0 370 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-214ENST00000530886 EDARQ9UNE0 448 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 LRRC14BA6NHZ5 514 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ISM1B1AKI9 464 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 D6RAR5 112 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 PLATP00750 562 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 GLAP06280 429 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SLC10A3P09131 477 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 PEPDP12955 493 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ANXA8P13928 327 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CPEP16870 476 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 CXCL3P19876 107 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 ACLYP53396 1101 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 PRMT2P55345 433 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 VLDLRP98155 873 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 DSC1Q08554 894 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 C2orf80Q0P641 193 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 NCF4Q15080 339 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 FRMPD2BQ6IN97 320 aa7.8□□□□□ -1.16
CSDE1-214ENST00000530886 SLC25A25Q6KCM7 469 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms