RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 B3GNT7Q8NFL0 401 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 KIF18AQ8NI77 898 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 SLC5A11Q8WWX8 675 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 NCLNQ969V3 563 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 PWWP2AQ96N64 755 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 QRFPRQ96P65 431 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 CSF3RQ99062 836 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 HAUS8Q9BT25 410 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 DEFB126Q9BYW3 111 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 CXXC4Q9H2H0 198 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 ZDHHC11Q9H8X9 412 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 HOMER3Q9NSC5 361 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 ARL15Q9NXU5 204 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 KCMF1Q9P0J7 381 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 MAD1L1Q9Y6D9 718 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 NINQ8N4C6 2090 aa13.27□□□□□ -0.29
CPSF1-201ENST00000526271 FAM166BA8MTA8 275 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 G3V3Y1 287 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 OR6B1O95007 311 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 GUCA1CO95843 209 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 JAK1P23458 1154 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 CCND1P24385 295 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 AHRP35869 848 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 PMPCAQ10713 525 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 SNTB1Q13884 538 aaKnown RBP13.26□□□□□ -0.29
CPSF1-201ENST00000526271 TOR1AIP1Q5JTV8 583 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 TRMT10BQ6PF06 316 aaKnown RBP13.26□□□□□ -0.29
CPSF1-201ENST00000526271 ADGRD1Q6QNK2 874 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 NXPE4Q6UWF7 544 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.26□□□□□ -0.29
CPSF1-201ENST00000526271 PSD4Q8NDX1 1056 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 ZNF592Q92610 1267 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 CAPZA3Q96KX2 299 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 SEMA4BQ9NPR2 832 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-201ENST00000526271 ZNF358Q9NW07 568 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 L3MBTL1Q9Y468 752 aa13.26□□□□□ -0.29
CPSF1-201ENST00000526271 MED12Q93074 2177 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 CDC7O00311 574 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 KLK8O60259 260 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 OR2J2O76002 312 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 URI1O94763 535 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-201ENST00000526271 RNH1P13489 461 aaKnown RBP13.25□□□□□ -0.29
CPSF1-201ENST00000526271 ENDOUP21128 410 aaKnown RBP13.25□□□□□ -0.29
CPSF1-201ENST00000526271 CHRNB4P30926 498 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 GRK3P35626 688 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 PAFAH1B1P43034 410 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 SARNPP82979 210 aaKnown RBP13.25□□□□□ -0.29
CPSF1-201ENST00000526271 FOXO1Q12778 655 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 ZNF750Q32MQ0 723 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 GXYLT1Q4G148 440 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 TEDDM1Q5T9Z0 273 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 HECTD2Q5U5R9 776 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 ABHD13Q7L211 337 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 ZNF572Q7Z3I7 529 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-201ENST00000526271 THOC6Q86W42 341 aaKnown RBP13.25□□□□□ -0.29
CPSF1-201ENST00000526271 MYO1HQ8N1T3 1032 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 OR2M7Q8NG81 312 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 OR5M9Q8NGP3 310 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 CALML6Q8TD86 181 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 MAGOHBQ96A72 148 aaKnown RBP13.25□□□□□ -0.29
CPSF1-201ENST00000526271 FAM167BQ9BTA0 163 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 TTTY12Q9BZ98 90 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 TP63Q9H3D4 680 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-201ENST00000526271 PELI2Q9HAT8 420 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 TAS2R13Q9NYV9 303 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 COQ3Q9NZJ6 369 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 FBXW2Q9UKT8 454 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 SLC22A14Q9Y267 594 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 PSAT1Q9Y617 370 aa13.25□□□□□ -0.29
CPSF1-201ENST00000526271 A0A0G2JNJ9 132 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 KDM4EB2RXH2 506 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-201ENST00000526271 NPIPA2E9PIF3 369 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 NPIPA3F8WFD2 350 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 KLRC4-KLRK1H3BQV0 150 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 CYR61O00622 381 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 IGHG3P01860 377 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 SERPINA6P08185 405 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 GLI4P10075 376 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 PGAM1P18669 254 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 IVDP26440 423 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 SOX3P41225 446 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 RGS4P49798 205 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 CLCN2P51788 898 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 AP1S2P56377 157 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 RGS1Q08116 209 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 ZNF460Q14592 562 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 LRRC8EQ6NSJ5 796 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 SEM1Q6ZVN7 128 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 TMPRSS11BQ86T26 416 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 ASB5Q8WWX0 329 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 RND1Q92730 232 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 TMEM125Q96AQ2 219 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 MS4A6EQ96DS6 147 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 RASL10BQ96S79 203 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 DLL4Q9NR61 685 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 PNO1Q9NRX1 252 aaKnown RBP13.24□□□□□ -0.29
CPSF1-201ENST00000526271 Q9UFV3 132 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 MMACHCQ9Y4U1 282 aa13.24□□□□□ -0.29
CPSF1-201ENST00000526271 ABCA2Q9BZC7 2435 aa13.23□□□□□ -0.29
CPSF1-201ENST00000526271 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms