RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CCDC63Q8NA47 563 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 CLEC1AQ8NC01 280 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 ARMC2Q8NEN0 867 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 TCP10LQ8TDR4 215 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 AGAP11Q8TF27 550 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 PEX11GQ96HA9 241 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 BBC3Q96PG8 261 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-203ENST00000526117 ZNF717Q9BY31 904 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-203ENST00000526117 ZNF700Q9H0M5 742 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 STMN4Q9H169 189 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-203ENST00000526117 COPS7BQ9H9Q2 264 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-203ENST00000526117 ACSS2Q9NR19 701 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 C19orf25Q9UFG5 118 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-203ENST00000526117 FBXL4Q9UKA2 621 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 MMACHCQ9Y4U1 282 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 CCDC88CQ9P219 2028 aa16.27■□□□□ 0.2
LMX1B-203ENST00000526117 IGHV1-45A0A0A0MS14 117 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 ARGFXA6NJG6 315 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 MKRN2OSH3BPM6 223 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 PSMD12O00232 456 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-203ENST00000526117 TM9SF1O15321 606 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 TRIM13O60858 407 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 DNAJB6O75190 326 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 JRKO75564 520 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 KRT6AP02538 564 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 KRT6BP04259 564 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 FAM87AP0C7U9 286 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 MYZAPP0CAP1 466 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 COX6A1P12074 109 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 ARL1P40616 181 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-203ENST00000526117 ETV4P43268 484 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 KRT6CP48668 564 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 GALNT1Q10472 559 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-203ENST00000526117 RUNX2Q13950 521 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 AP5B1Q2VPB7 878 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 SOWAHCQ53LP3 525 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-203ENST00000526117 CPZQ66K79 652 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 TTC19Q6DKK2 380 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-203ENST00000526117 OR4C11Q6IEV9 310 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 TCTN3Q6NUS6 607 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 ZNF793Q6ZN11 406 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 C10orf107Q8IVU9 208 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 ZNF595Q8IYB9 648 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 PRSS58Q8IYP2 241 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 ACOT4Q8N9L9 421 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 C7orf57Q8NEG2 295 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 METTL21AQ8WXB1 218 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 FAM111AQ96PZ2 611 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 TRIM55Q9BYV6 548 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 OR51B5Q9H339 312 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 C12orf65Q9H3J6 166 aaKnown RBP16.26■□□□□ 0.19
LMX1B-203ENST00000526117 ELOVL6Q9H5J4 265 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 DDX31Q9H8H2 851 aaKnown RBP16.26■□□□□ 0.19
LMX1B-203ENST00000526117 ATP13A2Q9NQ11 1180 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 MS4A12Q9NXJ0 267 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 KCMF1Q9P0J7 381 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 ADAM29Q9UKF5 820 aa16.26■□□□□ 0.19
LMX1B-203ENST00000526117 IGKV3D-11A0A0A0MRZ8 115 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 CYR61O00622 381 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 OR4F21O95013 312 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 ATXN8OSP0DMR3 200 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 CREB1P16220 341 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 TSPAN8P19075 237 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 CERS1P27544 350 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 SERPINB5P36952 375 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 SSR2P43308 183 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 LIM2P55344 173 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 HSD17B7P56937 341 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 AP2B1P63010 937 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 OLR1P78380 273 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 CSTF3Q12996 717 aaKnown RBP16.25■□□□□ 0.19
LMX1B-203ENST00000526117 DDX39BQ13838 428 aaKnown RBP16.25■□□□□ 0.19
LMX1B-203ENST00000526117 MINDY4Q4G0A6 757 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 CFAP157Q5JU67 520 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 RNF165Q6ZSG1 346 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 NDUFAF7Q7L592 441 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 HPS6Q86YV9 775 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 SCUBE1Q8IWY4 988 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 SHISA5Q8N114 240 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 CCNYL1Q8N7R7 359 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 SLC39A7Q92504 469 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 CNDP1Q96KN2 507 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 PRDM9Q9NQV7 894 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 RIC8BQ9NVN3 520 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 SLC17A7Q9P2U7 560 aa16.25■□□□□ 0.19
LMX1B-203ENST00000526117 MRPS33Q9Y291 106 aaKnown RBP16.25■□□□□ 0.19
LMX1B-203ENST00000526117 UBFD1O14562 309 aaKnown RBP16.24■□□□□ 0.19
LMX1B-203ENST00000526117 NPHS1O60500 1241 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 PRMT3O60678 531 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 SPAG7O75391 227 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 ETHE1O95571 254 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 ALDH3A1P30838 453 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 BSGP35613 385 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 NEK2P51955 445 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 RAP1GDS1P52306 607 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 SLC18A1P54219 525 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 CASP8Q14790 479 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 PCOLCEQ15113 449 aa16.24■□□□□ 0.19
LMX1B-203ENST00000526117 MRM1Q6IN84 353 aaKnown RBP16.24■□□□□ 0.19
LMX1B-203ENST00000526117 RIPOR1Q6ZS17 1223 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms