RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SKILP12757 684 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 P4HA1P13674 534 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 PDHA2P29803 388 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 CLCN4P51793 760 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 TMEM50BP56557 158 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 KCNK10P57789 538 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 IRX4P78413 519 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 ACTN3Q08043 901 aaPredicted RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 CBX3Q13185 183 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 PPP2R5CQ13362 524 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 GCKRQ14397 625 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 MTF1Q14872 753 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 FAM189A2Q15884 450 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 SGCBQ16585 318 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 FASTKD1Q53R41 847 aaKnown RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 ZNF776Q68DI1 518 aaPredicted RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 SNRNP48Q6IEG0 339 aaKnown RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 KIF6Q6ZMV9 814 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 FRRS1Q6ZNA5 592 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 Q6ZVQ6 151 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 PRSS42Q7Z5A4 293 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 ZC3H3Q8IXZ2 948 aaKnown RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 SLC22A15Q8IZD6 547 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 SLC43A2Q8N370 569 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 METTL4Q8N3J2 472 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 CARNMT1Q8N4J0 409 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 SPATA18Q8TC71 538 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 MGARPQ8TDB4 240 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 GUCD1Q96NT3 240 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 ZNF300Q96RE9 604 aaPredicted RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 GAL3ST4Q96RP7 486 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 MCRIP2Q9BUT9 160 aaKnown RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 PAPOLGQ9BWT3 736 aaKnown RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 MAGEF1Q9HAY2 307 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 ZNF319Q9P2F9 582 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 KLK11Q9UBX7 282 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 KCNK6Q9Y257 313 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 EXOC6BQ9Y2D4 811 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 ETV7Q9Y603 341 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 THOC2Q8NI27 1593 aaKnown RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 SYNJ2O15056 1496 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 ARHGAP35Q9NRY4 1499 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 KIAA0586Q9BVV6 1533 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 ZNF608Q9ULD9 1512 aaPredicted RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 SPATA31D1Q6ZQQ2 1576 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 LOC105371242A0A075B767 164 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 A0A087X002 238 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 SYCE3A1L190 88 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 CHUKO15111 745 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 KINO60870 393 aaKnown RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 HSF2BPO75031 334 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 ATP6V1G1O75348 118 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 DUS4LO95620 317 aaKnown RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 AOC1P19801 751 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 ACKR3P25106 362 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 RPL9P32969 192 aaKnown RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 SMSP52788 366 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 ABCE1P61221 599 aaKnown RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 IRX1P78414 480 aaPredicted RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 FASTKD3Q14CZ7 662 aaKnown RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 NECTIN1Q15223 517 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 RFTN2Q52LD8 501 aaPredicted RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 SPANXN4Q5MJ08 99 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 ETFRF1Q6IPR1 90 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 CD164L2Q6UWJ8 174 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 TMEM64Q6YI46 380 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 LAX1Q8IWV1 398 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 NAT8LQ8N9F0 302 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 OR9Q2Q8NGE9 314 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 OR52B6Q8NGF0 335 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 OR5M9Q8NGP3 310 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 SMPDL3AQ92484 453 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 SLC35C1Q96A29 364 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 CCDC47Q96A33 483 aaKnown RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 NSMCE3Q96MG7 304 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 AGAP4Q96P64 663 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 FAM213AQ9BRX8 229 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 CCM2Q9BSQ5 444 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 FGFBP2Q9BYJ0 223 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 GPN1Q9HCN4 374 aaPredicted RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 S100A14Q9HCY8 104 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 ZCCHC3Q9NUD5 404 aaKnown RBP3.35□□□□□ -1.87
SKP1-212ENST00000523966 PLEK2Q9NYT0 353 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 MOSPD1Q9UJG1 213 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 EXOC7Q9UPT5 735 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 KNSTRNQ9Y448 316 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 WIPI2Q9Y4P8 454 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 SNAPC4Q5SXM2 1469 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 ARAP1Q96P48 1450 aa3.35□□□□□ -1.87
SKP1-212ENST00000523966 MAP3K1Q13233 1512 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.34□□□□□ -1.87
SKP1-212ENST00000523966 TMEM129A0AVI4 362 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 TMCO5BA8MYB1 307 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 CCSO14618 274 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 SIGLEC5O15389 551 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 MLNRO43193 412 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 PSMD3O43242 534 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 ECE2O60344 883 aa3.34□□□□□ -1.87
SKP1-212ENST00000523966 THEGLP0DJG4 465 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms