RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 FCRLBQ6BAA4 426 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 WDR93Q6P2C0 686 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 PAPD4Q6PIY7 484 aaKnown RBP16.77■□□□□ 0.28
CLK4-211ENST00000522556 QSOX2Q6ZRP7 698 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 CLNKQ7Z7G1 428 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 KBTBD2Q8IY47 623 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 C4orf33Q8N1A6 199 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 OR4F6Q8NGB9 312 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 ACMSDQ8TDX5 336 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLK4-211ENST00000522556 ZBTB9Q96C00 473 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 MTFMTQ96DP5 389 aaKnown RBP16.77■□□□□ 0.28
CLK4-211ENST00000522556 SERINC2Q96SA4 455 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 CCDC77Q9BR77 488 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 ZNF717Q9BY31 904 aaPredicted RBP16.77■□□□□ 0.28
CLK4-211ENST00000522556 PARD6BQ9BYG5 372 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 FARSBQ9NSD9 589 aaKnown RBP16.77■□□□□ 0.28
CLK4-211ENST00000522556 KCMF1Q9P0J7 381 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 TMCO1Q9UM00 188 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 DAPP1Q9UN19 280 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 PCDHGB7Q9Y5F8 929 aa16.77■□□□□ 0.28
CLK4-211ENST00000522556 A8MUA0 341 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 H0YIV9 168 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 J3QKU1 62 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 PSMD12O00232 456 aaPredicted RBP16.76■□□□□ 0.27
CLK4-211ENST00000522556 CYR61O00622 381 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 PLPP1O14494 284 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 MAN1A2O60476 641 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 PRMT3O60678 531 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 DPM1O60762 260 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 EEDO75530 441 aaKnown RBP16.76■□□□□ 0.27
CLK4-211ENST00000522556 PRKRAO75569 313 aaKnown RBP16.76■□□□□ 0.27
CLK4-211ENST00000522556 CLDN9O95484 217 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 SERPINA7P05543 415 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 KRT15P19012 456 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 IL10P22301 178 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 JAK1P23458 1154 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 SOX11P35716 441 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 CCNG1P51959 295 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 OR4D2P58180 307 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 BTBD16Q32M84 506 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 PLEKHN1Q494U1 663 aaPredicted RBP16.76■□□□□ 0.27
CLK4-211ENST00000522556 ZNF678Q5SXM1 525 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 DEPDC1Q5TB30 811 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 SCUBE1Q8IWY4 988 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 KIF2BQ8N4N8 673 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 ACOT4Q8N9L9 421 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 TRPC4APQ8TEL6 797 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 UBE2E3Q969T4 207 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 ATP6V1E2Q96A05 226 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 MAGEB10Q96LZ2 347 aaPredicted RBP16.76■□□□□ 0.27
CLK4-211ENST00000522556 TUBB6Q9BUF5 446 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 C1QTNF3Q9BXJ4 246 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 COPS7BQ9H9Q2 264 aaPredicted RBP16.76■□□□□ 0.27
CLK4-211ENST00000522556 G3BP2Q9UN86 482 aaKnown RBP16.76■□□□□ 0.27
CLK4-211ENST00000522556 PLAAQ9Y263 795 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 SHANK1Q9Y566 2161 aa16.76■□□□□ 0.27
CLK4-211ENST00000522556 GCN1Q92616 2671 aaKnown RBP16.76■□□□□ 0.27
CLK4-211ENST00000522556 TCRBV16S1A1N1A0A5B0 115 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 TLDC2A0PJX2 215 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 G3V2L1 256 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 UGDHO60701 494 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 OR4F21O95013 312 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 PROCP04070 461 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 ALPPP05187 535 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 CYC1P08574 325 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 NUDT17P0C025 328 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 PIK3CBP42338 1070 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 SSR2P43308 183 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 HERVK_113P63132 956 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 SGO1Q5FBB7 561 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 AGAP7PQ5VUJ5 663 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 NIPAL1Q6NVV3 410 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 METTL2BQ6P1Q9 378 aaKnown RBP16.75■□□□□ 0.27
CLK4-211ENST00000522556 IGFL2Q6UWQ7 119 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 IGFL3Q6UXB1 125 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 CUZD1Q86UP6 607 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 CATSPER1Q8NEC5 780 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 CAVIN3Q969G5 261 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 CMTM7Q96FZ5 175 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 VPS50Q96JG6 964 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 AGAP4Q96P64 663 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 KCNC2Q96PR1 638 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 HBEGFQ99075 208 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 NPAS2Q99743 824 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 NTMT1Q9BV86 223 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 NPLQ9BXD5 320 aaPredicted RBP16.75■□□□□ 0.27
CLK4-211ENST00000522556 ERVK-6Q9BXR3 956 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 PRDM9Q9NQV7 894 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 PLA2G3Q9NZ20 509 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 C5AR2Q9P296 337 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 C19orf25Q9UFG5 118 aaPredicted RBP16.75■□□□□ 0.27
CLK4-211ENST00000522556 PCDHGA11Q9Y5H2 935 aa16.75■□□□□ 0.27
CLK4-211ENST00000522556 PCDH17O14917 1159 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 TMPRSS11DO60235 418 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 GLRA3O75311 464 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 SUPT7LO94864 414 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 SCELO95171 688 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 ZIC2O95409 532 aaPredicted RBP16.74■□□□□ 0.27
CLK4-211ENST00000522556 GBAP04062 536 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms