RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 TRBV5-5A0A0J9YX44 114 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 PMS2P5A8MQ11 134 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 M0R296 226 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 NME2P1O60361 137 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 ATP6V1G1O75348 118 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 CDK2AP2O75956 126 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 BAG3O95817 575 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 IGHV4-59P01825 116 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 NR3C1P04150 777 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 EDN1P05305 212 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 SERPINF2P08697 491 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 DLATP10515 647 aaKnown RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 KRT13P13646 458 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 F3P13726 295 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 FUT1P19526 365 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 SOX6P35712 828 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 DCTP40126 519 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 NKX2-1P43699 371 aaPredicted RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 NUMBP49757 651 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 CLDN17P56750 224 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 LINC01547P58512 204 aaPredicted RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 CCZ1BP86790 482 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 CCZ1P86791 482 aaPredicted RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 MYL7Q01449 175 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 GIT2Q14161 759 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 HERC3Q15034 1050 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 PRAMEF7Q5VXH5 474 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 SLC35E4Q6ICL7 350 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 UGT3A1Q6NUS8 523 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 CASC1Q6TDU7 716 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 RGS9BPQ6ZS82 235 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 ANO5Q75V66 913 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 ZNF444Q8N0Y2 327 aaPredicted RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 THEM5Q8N1Q8 247 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 DNAJC22Q8N4W6 341 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 FAM89BQ8N5H3 189 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 OR10V1Q8NGI7 309 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 OR13C3Q8NGS6 347 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 OLIG1Q8TAK6 271 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 FAM76AQ8TAV0 307 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 METTL21AQ8WXB1 218 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 HAS2Q92819 552 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 ESAMQ96AP7 390 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 ZNF501Q96CX3 271 aaPredicted RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 C4orf45Q96LM5 186 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 ZNF354BQ96LW1 612 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 BTBD9Q96Q07 612 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 F2RL3Q96RI0 385 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 RHNO1Q9BSD3 238 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 NMNAT2Q9BZQ4 307 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 SLC39A8Q9C0K1 460 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 ZNF696Q9H7X3 374 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 RAVER2Q9HCJ3 691 aaKnown RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 PHPT1Q9NRX4 125 aaPredicted RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 HOMER3Q9NSC5 361 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 PTTG2Q9NZH5 202 aa3.62□□□□□ -1.83
SQLE-204ENST00000520493 ZNF624Q9P2J8 865 aaPredicted RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 C19orf25Q9UFG5 118 aaPredicted RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 DDX49Q9Y6V7 483 aaKnown RBP3.62□□□□□ -1.83
SQLE-204ENST00000520493 ANTXRLA6NF34 631 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 KLF11O14901 512 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 PSMD3O43242 534 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 RIPK2O43353 540 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 PCDH7O60245 1069 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 CLN5O75503 358 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 SCGB2A1O75556 95 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 GRAP2O75791 330 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 TSHBP01222 138 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 VTNP04004 478 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 SFTPBP07988 381 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 FRMD6-AS1P0C7T7 363 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 ITGA3P26006 1051 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 PKLRP30613 574 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 SSTR1P30872 391 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 CLCN4P51793 760 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 ABRQ12979 859 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 GPR17Q13304 367 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 TMEM30BQ3MIR4 351 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 ZC2HC1CQ53FD0 456 aaPredicted RBP3.61□□□□□ -1.83
SQLE-204ENST00000520493 ARMCX4Q5H9R4 360 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 LCN1P1Q5VSP4 162 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 ISCA2Q86U28 154 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 STHQ8IWL8 128 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 SAP25Q8TEE9 199 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 SHC3Q92529 594 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 PIK3R3Q92569 461 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 ARHGAP45Q92619 1136 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 THRSPQ92748 146 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 NECTIN4Q96NY8 510 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 COQ7Q99807 217 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 ALKBH7Q9BT30 221 aaPredicted RBP3.61□□□□□ -1.83
SQLE-204ENST00000520493 TPPP3Q9BW30 176 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 CARD6Q9BX69 1037 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 LRRC2Q9BYS8 371 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.61□□□□□ -1.83
SQLE-204ENST00000520493 TMOD3Q9NYL9 352 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 CNOT2Q9NZN8 540 aaKnown RBP3.61□□□□□ -1.83
SQLE-204ENST00000520493 COX16Q9P0S2 106 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 FBXL4Q9UKA2 621 aa3.61□□□□□ -1.83
SQLE-204ENST00000520493 ELF5Q9UKW6 265 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms