RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 CHRNB4P30926 498 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 FEN1P39748 380 aaKnown RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 SOX3P41225 446 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 TSFMP43897 325 aaKnown RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 CDKL1Q00532 357 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 PPP1R8Q12972 351 aaKnown RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 HNRNPA0Q13151 305 aaKnown RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 CDH18Q13634 790 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 GIT2Q14161 759 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 OR1C1Q15619 314 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 TMEM30BQ3MIR4 351 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 SPANXN4Q5MJ08 99 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 ARHGEF16Q5VV41 709 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 OR4C11Q6IEV9 310 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 MFSD7Q6UXD7 560 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 C3P1Q6ZMU1 363 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 C1orf186Q6ZWK4 172 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 ADCK1Q86TW2 530 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZC3H3Q8IXZ2 948 aaKnown RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 SLC43A2Q8N370 569 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZNF843Q8N446 348 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 DDHD1Q8NEL9 900 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 TRPV3Q8NET8 790 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 OR13C5Q8NGS8 318 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 SPATA18Q8TC71 538 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 SLCO2A1Q92959 643 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 GLYATL1Q969I3 302 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 WBP2Q969T9 261 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 SLC35C1Q96A29 364 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 BPIFA2Q96DR5 249 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 FAM111AQ96PZ2 611 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZNF300Q96RE9 604 aaPredicted RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 NODALQ96S42 347 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 OVOL2Q9BRP0 275 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZNF577Q9BSK1 485 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 RBM4Q9BWF3 364 aaKnown RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZNF319Q9P2F9 582 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 DBF4Q9UBU7 674 aaPredicted RBP2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 FETUBQ9UGM5 382 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 NCKAP1Q9Y2A7 1128 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 SH3GLB1Q9Y371 365 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 SCN5AQ14524 2016 aa2.86□□□□□ -1.95
RNU6-390P-201ENST00000516259 CCDC162PA2VCL2 907 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 CFAP73A6NFT4 308 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 SRRM4A7MD48 611 aaKnown RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 LMO7DNF2Z398 122 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 TRAFD1O14545 582 aaPredicted RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 RASGRF2O14827 1237 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZFAND5O76080 213 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 OR6A2O95222 327 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 TRIM16O95361 564 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 TXNDC12O95881 172 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 PDGFBP01127 241 aaPredicted RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 SP1P08047 785 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 HMBSP08397 361 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 CD48P09326 243 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 SKILP12757 684 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 UGT1A6P19224 532 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 CCNA2P20248 432 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 GLRA1P23415 457 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 CD86P42081 329 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 TNFRSF4P43489 277 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 GPC3P51654 580 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 HNRNPFP52597 415 aaKnown RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 SMSP52788 366 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 PAX9P55771 341 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 GSCP56915 257 aaPredicted RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 ERVK-16P61578 105 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 HTD2P86397 168 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 GFPT1Q06210 699 aaPredicted RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 RIGQ13278 110 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 PDK1Q15118 436 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 SGSM1Q2NKQ1 1148 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZNF876PQ49A33 203 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 MPPE1Q53F39 396 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 WLSQ5T9L3 541 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 C12orf60Q5U649 245 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 NKAIN2Q5VXU1 208 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 HIST2H2AA3Q6FI13 130 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 MEX3BQ6ZN04 569 aaKnown RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 Q6ZVQ6 151 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 BTN2A1Q7KYR7 527 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 C5orf24Q7Z6I8 188 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 TAF8Q7Z7C8 310 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 CUZD1Q86UP6 607 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 DND1Q8IYX4 353 aaKnown RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 GVQW1Q8N7I0 195 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 TCEANCQ8N8B7 351 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 TMEM178AQ8NBL3 297 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 ANKRD20A12PQ8NF67 263 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 TMEM185AQ8NFB2 350 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 OR6M1Q8NGM8 313 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 OR5M9Q8NGP3 310 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 DQX1Q8TE96 717 aaKnown RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 UBTD2Q8WUN7 234 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 PRCCQ92733 491 aaPredicted RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 FAM46BQ96A09 425 aa2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 ZNF501Q96CX3 271 aaPredicted RBP2.85□□□□□ -1.95
RNU6-390P-201ENST00000516259 MRPL38Q96DV4 380 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms