RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 GSPT2Q8IYD1 628 aaKnown RBP12.01□□□□□ -0.49
CLCN3-210ENST00000515420 IQCKQ8N0W5 287 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 SHISA5Q8N114 240 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 TMEM151AQ8N4L1 468 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 C7orf57Q8NEG2 295 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 CPT1CQ8TCG5 803 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 BRIX1Q8TDN6 353 aaKnown RBP12.01□□□□□ -0.49
CLCN3-210ENST00000515420 TSLPQ969D9 159 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 PHF21BQ96EK2 531 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 PTCHD1Q96NR3 888 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 RBCK1Q9BYM8 510 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 CLMPQ9H6B4 373 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 ANKZF1Q9H8Y5 726 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 LYRM4Q9HD34 91 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 MMP25Q9NPA2 562 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 PRDM7Q9NQW5 492 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 TEKT2Q9UIF3 430 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 PCTPQ9UKL6 214 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 DAPP1Q9UN19 280 aa12.01□□□□□ -0.49
CLCN3-210ENST00000515420 MYO18BQ8IUG5 2567 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 DYTNA2CJ06 578 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 FOXE1O00358 373 aaPredicted RBP12□□□□□ -0.49
CLCN3-210ENST00000515420 CDK2AP1O14519 115 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 B4GALT2O60909 372 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 SEC24DO94855 1032 aaPredicted RBP12□□□□□ -0.49
CLCN3-210ENST00000515420 CLDN9O95484 217 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 RPS17P08708 135 aaKnown RBP12□□□□□ -0.49
CLCN3-210ENST00000515420 SBK3P0C264 359 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 PCNAP12004 261 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 TAC1P20366 129 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 CERS1P27544 350 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 CCNG1P51959 295 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 OR4D2P58180 307 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 KCNC4Q03721 635 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 ACTN3Q08043 901 aaPredicted RBP12□□□□□ -0.49
CLCN3-210ENST00000515420 RUNX2Q13950 521 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 TLR1Q15399 786 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 GGTA1PQ4G0N0 100 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 DEPDC1Q5TB30 811 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 ATCAYQ86WG3 371 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 MYLK4Q86YV6 388 aaPredicted RBP12□□□□□ -0.49
CLCN3-210ENST00000515420 LGI4Q8N135 537 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 HUS1BQ8NHY5 278 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 WDR20Q8TBZ3 569 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 MZB1Q8WU39 189 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 UBLCP1Q8WVY7 318 aaPredicted RBP12□□□□□ -0.49
CLCN3-210ENST00000515420 HAS2Q92819 552 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 F2RL3Q96RI0 385 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 MFRPQ9BY79 579 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 ILKAPQ9H0C8 392 aaPredicted RBP12□□□□□ -0.49
CLCN3-210ENST00000515420 ZBTB20Q9HC78 741 aaPredicted RBP12□□□□□ -0.49
CLCN3-210ENST00000515420 DMRT3Q9NQL9 472 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 SPENQ96T58 3664 aaKnown RBP12□□□□□ -0.49
CLCN3-210ENST00000515420 TENM4Q6N022 2769 aa12□□□□□ -0.49
CLCN3-210ENST00000515420 IGHV3-20A0A0C4DH32 117 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 A0A0G2JN53 185 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 OR2W5A6NFC9 320 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 LRRC14BA6NHZ5 514 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 SAGE2PA6NJ88 616 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 A8MT66 165 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 CYR61O00622 381 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 OR7A17O14581 309 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 OTCP00480 354 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 HIST1H1TP22492 207 aaPredicted RBP11.99□□□□□ -0.49
CLCN3-210ENST00000515420 ATP5A1P25705 553 aaKnown RBP11.99□□□□□ -0.49
CLCN3-210ENST00000515420 PTX3P26022 381 aaPredicted RBP11.99□□□□□ -0.49
CLCN3-210ENST00000515420 MLLT10P55197 1068 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 LIM2P55344 173 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 SLC26A5P58743 744 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 BTG2P78543 158 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 TRAF3Q13114 568 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 CUL3Q13618 768 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 ZNF169Q14929 603 aaPredicted RBP11.99□□□□□ -0.49
CLCN3-210ENST00000515420 INPP5JQ15735 1006 aaPredicted RBP11.99□□□□□ -0.49
CLCN3-210ENST00000515420 AP5B1Q2VPB7 878 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 PLEKHN1Q494U1 663 aaPredicted RBP11.99□□□□□ -0.49
CLCN3-210ENST00000515420 ABHD17BQ5VST6 288 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 ZNF793Q6ZN11 406 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 UBE3DQ7Z6J8 389 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 SLC22A9Q8IVM8 553 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 SIRT6Q8N6T7 355 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 ACOT4Q8N9L9 421 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 GALNT11Q8NCW6 608 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 MYRIPQ8NFW9 859 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 DNAJB14Q8TBM8 379 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 ZNF483Q8TF39 744 aaPredicted RBP11.99□□□□□ -0.49
CLCN3-210ENST00000515420 ATP6V1E2Q96A05 226 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 RGMAQ96B86 450 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 NOL11Q9H8H0 719 aaKnown RBP11.99□□□□□ -0.49
CLCN3-210ENST00000515420 ZBTB26Q9HCK0 441 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 MS4A12Q9NXJ0 267 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 KCMF1Q9P0J7 381 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 PTGFRNQ9P2B2 879 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 DCDC2Q9UHG0 476 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 SPACA6W5XKT8 324 aa11.99□□□□□ -0.49
CLCN3-210ENST00000515420 PRRC2CQ9Y520 2896 aaKnown RBP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 RP1L1Q8IWN7 2480 aaPredicted RBP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 FAM227AF5H4B4 570 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms