RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ZNF583	Q96ND8	569 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CCDC3	Q9BQI4	270 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	RHNO1	Q9BSD3	238 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	FTHL17	Q9BXU8	183 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TFB2M	Q9H5Q4	396 aa	Known RBP	3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	VIPAS39	Q9H9C1	493 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	LIN28A	Q9H9Z2	209 aa	Known RBP	3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	LRRC4	Q9HBW1	653 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	RAB9B	Q9NP90	201 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	HOMER3	Q9NSC5	361 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ACOXL	Q9NUZ1	547 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ELF5	Q9UKW6	265 aa	Predicted RBP	3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TCF19	Q9Y242	345 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	AP1M2	Q9Y6Q5	423 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267		R4GN57	208 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	FAM205A	Q6ZU69	1335 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TTC37	Q6PGP7	1564 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CDC42BPB	Q9Y5S2	1711 aa		3.07	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	IGHV4-61	A0A0C4DH41	118 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ERVV-2	B6SEH9	535 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267		E5RGE8	158 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	C16orf97	H3BN30	126 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267		K7EPI3	171 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CHEK1	O14757	476 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	EPHB6	O15197	1021 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PSMD3	O43242	534 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ATP8B3	O60423	1300 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PLCH2	O75038	1416 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ATP6V1G1	O75348	118 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PDGFB	P01127	241 aa	Predicted RBP	3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	IGHV4-59	P01825	116 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ATP1B1	P05026	303 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SP1	P08047	785 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GSTA2	P09210	222 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CETP	P11597	493 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	KRT5	P13647	590 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ANPEP	P15144	967 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PAX1	P15863	534 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	FCAR	P24071	287 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	RPA1	P27694	616 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	MAGEA11	P43364	429 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TNFSF10	P50591	281 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	KCNJ10	P78508	379 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GABPA	Q06546	454 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SCGB2A2	Q13296	93 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GPR17	Q13304	367 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SHROOM2	Q13796	1616 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TRIM29	Q14134	588 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GRB14	Q14449	540 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	UMODL1	Q5DID0	1318 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	XKR3	Q5GH77	459 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TECRL	Q5HYJ1	363 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	FGD3	Q5JSP0	725 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ERCC6L2	Q5T890	1561 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ZCCHC11	Q5TAX3	1644 aa	Known RBP	3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ZNF776	Q68DI1	518 aa	Predicted RBP	3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	OR6B2	Q6IFH4	312 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	UNC5D	Q6UXZ4	953 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	C15orf52	Q6ZUT6	534 aa	Known RBP	3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ANO5	Q75V66	913 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TRMT1L	Q7Z2T5	733 aa	Known RBP	3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SYVN1	Q86TM6	617 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	KTN1	Q86UP2	1357 aa	Known RBP	3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	RALGAPB	Q86X10	1494 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GPC2	Q8N158	579 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	KLHDC1	Q8N7A1	406 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	OR7A2P	Q8NGA2	310 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	OR4C15	Q8NGM1	316 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GANC	Q8TET4	914 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SEPT8	Q92599	483 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CD101	Q93033	1021 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SHARPIN	Q9H0F6	387 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	MMP28	Q9H239	520 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	MARCH7	Q9H992	704 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	UPF2	Q9HAU5	1272 aa	Known RBP	3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	DUOX2	Q9NRD8	1548 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PANK4	Q9NVE7	773 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TBC1D13	Q9NVG8	400 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	MBD5	Q9P267	1494 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	FAM135A	Q9P2D6	1515 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PILRB	Q9UKJ0	227 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PRDM4	Q9UKN5	801 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	NSG2	Q9Y328	171 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	TMED7	Q9Y3B3	224 aa		3.06	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	KDM5D	Q9BY66	1539 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ARHGEF12	Q9NZN5	1544 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	UHRF1BP1	Q6BDS2	1440 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ERBIN	Q96RT1	1412 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	ZBED9	Q6R2W3	1325 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SERINC4	A6NH21	518 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	NKX6-3	A6NJ46	265 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	PRAC2	D3DTV9	90 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267		H3BMM5	538 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CCL24	O00175	119 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	KLF11	O14901	512 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	CHUK	O15111	745 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	GRID2	O43424	1007 aa		3.05	□□□□□ -1.92
CALCOCO2-223	ENST00000514267	SYT7	O43581	403 aa		3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms