RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 KRT6CP48668 564 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 CCL11P51671 97 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 CDR2Q01850 454 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 SNX1Q13596 522 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 GRB14Q14449 540 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 HEPACAMQ14CZ8 416 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 LRRC37A5PQ49AS3 106 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 GPAT3Q53EU6 434 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 IL23RQ5VWK5 629 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 C9orf57Q5W0N0 161 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 TCEAL6Q6IPX3 200 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 KDELC1Q6UW63 502 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 TMEM207Q6UWW9 146 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 CEACAM20Q6UY09 585 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 TMEM64Q6YI46 380 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 CDHR3Q6ZTQ4 885 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 FOXL2NBQ6ZUU3 175 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 BNIPLQ7Z465 357 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 NFE4Q86UQ8 179 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 SLC43A2Q8N370 569 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 LRRC17Q8N6Y2 441 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 CCDC185Q8N715 623 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 MAB21L3Q8N8X9 362 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 OR52B4Q8NGK2 314 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 OR6M1Q8NGM8 313 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 N4BP2L2Q92802 583 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 SLC35C1Q96A29 364 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 RAB7BQ96AH8 199 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 MRPL53Q96EL3 112 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 RPGRIP1Q96KN7 1286 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 LMLNQ96KR4 655 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 CXorf58Q96LI9 332 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 S1PR3Q99500 378 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 TXN2Q99757 166 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 CCM2Q9BSQ5 444 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 CRACR2AQ9BSW2 395 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 FUNDC2Q9BWH2 189 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 C1QTNF4Q9BXJ3 329 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 EGLN1Q9GZT9 426 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 THAP2Q9H0W7 228 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 ZNF665Q9H7R5 613 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 DDX31Q9H8H2 851 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 ROPN1Q9HAT0 212 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 HACD3Q9P035 362 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 TAAR2Q9P1P5 351 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 DBF4Q9UBU7 674 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 ELF5Q9UKW6 265 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 MGAT4BQ9UQ53 548 aa4.47□□□□□ -1.69
CALCOCO2-222ENST00000514006 SYNJ2BP-COX16A0A087WUM0 186 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 TRBV4-1A0A0J9YWV2 114 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 A0A1B0GWJ7 208 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 SERINC4A6NH21 518 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 LACTBL1A8MY62 500 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 CYTIPO60759 359 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 HMMRO75330 724 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 SAP30O75446 220 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 CAVIN2O95810 425 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 PRKAR1AP10644 381 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 KRT13P13646 458 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 CEACAM1P13688 526 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 ALDH3B1P43353 468 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 OR1D5P58170 312 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 NLRP11P59045 1033 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 DCDC1P59894 354 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 MYBPC1Q00872 1141 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 SP3Q02447 781 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 OVGP1Q12889 678 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 HIST2H2AA3Q6FI13 130 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 FAM159AQ6UWV7 190 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 ARMCX2Q7L311 632 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 C1QL2Q7Z5L3 287 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 ZNF573Q86YE8 665 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 ELMOD1Q8N336 334 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 TEX26Q8N6G2 289 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 TCEANCQ8N8B7 351 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 MINDY2Q8NBR6 621 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 CCDC197Q8NCU1 140 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 OR4L1Q8NH43 312 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 CD101Q93033 1021 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 ZNF274Q96GC6 653 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 AGPAT1Q99943 283 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 TPPP3Q9BW30 176 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 C6orf106Q9H6K1 298 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 ACTR8Q9H981 624 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 VAT1LQ9HCJ6 419 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 HPS4Q9NQG7 708 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 ZNF319Q9P2F9 582 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 MRTO4Q9UKD2 239 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 POMT2Q9UKY4 750 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 IKBKGQ9Y6K9 419 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 UMODL1Q5DID0 1318 aa4.46□□□□□ -1.7
CALCOCO2-222ENST00000514006 A0A087WUV0 522 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 ADAM12O43184 909 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 IDH1O75874 414 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 ATP1A1P05023 1023 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 EDN1P05305 212 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 APRTP07741 180 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 CYP2F1P24903 491 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 SOX6P35712 828 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms