RNA–Protein interactions for RNA: ENST00000512331.5

RUFY3-210, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-210ENST00000512331 FEM1AQ9BSK4 669 aa6.31□□□□□ -1.4
RUFY3-210ENST00000512331 KIFC1Q9BW19 673 aa6.31□□□□□ -1.4
RUFY3-210ENST00000512331 TM2D2Q9BX73 214 aa6.31□□□□□ -1.4
RUFY3-210ENST00000512331 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
RUFY3-210ENST00000512331 KLHL4Q9C0H6 718 aa6.31□□□□□ -1.4
RUFY3-210ENST00000512331 MRM3Q9HC36 420 aaKnown RBP6.31□□□□□ -1.4
RUFY3-210ENST00000512331 IARS2Q9NSE4 1012 aaKnown RBP6.31□□□□□ -1.4
RUFY3-210ENST00000512331 TREX1Q9NSU2 369 aa6.31□□□□□ -1.4
RUFY3-210ENST00000512331 C20orf96Q9NUD7 363 aaPredicted RBP6.31□□□□□ -1.4
RUFY3-210ENST00000512331 INTS9Q9NV88 658 aaKnown RBP6.31□□□□□ -1.4
RUFY3-210ENST00000512331 MARCH4Q9P2E8 410 aaPredicted RBP6.31□□□□□ -1.4
RUFY3-210ENST00000512331 CARD8Q9Y2G2 431 aa6.31□□□□□ -1.4
RUFY3-210ENST00000512331 IKBKGQ9Y6K9 419 aa6.31□□□□□ -1.4
RUFY3-210ENST00000512331 C5orf42Q9H799 3197 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 TRPM6Q9BX84 2022 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 FAM47DPA6NHR8 397 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 FAM90A8PA6NJQ4 464 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 FAM157AC9JC47 383 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 NPIPB11E5RHQ5 1161 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 K7ERQ8 282 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 CCL22O00626 93 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 ZNF197O14709 1029 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 PRPF4O43172 522 aaKnown RBP eCLIP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SLC25A17O43808 307 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 TYROBPO43914 113 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 HS6ST1O60243 411 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SLC25A12O75746 678 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 TOP3BO95985 862 aaKnown RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 PENKP01210 267 aaPredicted RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 MT-ND3P03897 115 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 FGF1P05230 155 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SERPINF2P08697 491 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SNRPAP09012 282 aaKnown RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 FAM90A13PP0C7W8 464 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 FAM90A24PP0C7X0 464 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 PIRTP0C851 137 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 KRT4P19013 534 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 HLA-DPA1P20036 260 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 CA4P22748 312 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 EEF1DP29692 281 aaKnown RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 HLA-FP30511 346 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 RPA3P35244 121 aaPredicted RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SERPINB9P50453 376 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 CLDN2P57739 230 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 RHOAP61586 193 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SLC18A2Q05940 514 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 HYAL1Q12794 435 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 TRAF2Q12933 501 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 FOXE3Q13461 319 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 RUNX2Q13950 521 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 PCLAFQ15004 111 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 COL28A1Q2UY09 1125 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 LSM12Q3MHD2 195 aaKnown RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 HSP90AA5PQ58FG0 334 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 MPP7Q5T2T1 576 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 FNDC7Q5VTL7 733 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SH2D5Q6ZV89 423 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 CYS1Q717R9 158 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 TBC1D26Q86UD7 250 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 GALNT13Q8IUC8 556 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 VRK3Q8IV63 474 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 ARID3BQ8IVW6 561 aaPredicted RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 BANPQ8N9N5 519 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 IL17RCQ8NAC3 791 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 LPCAT1Q8NF37 534 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 OR6K2Q8NGY2 324 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 FIBINQ8TAL6 211 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SGCDQ92629 289 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 CENPTQ96BT3 561 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 MRPL38Q96DV4 380 aaKnown RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 ATXN7L3BQ96GX2 97 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 RANBP9Q96S59 729 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SMC6Q96SB8 1091 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 ABHD1Q96SE0 405 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 RBBP8Q99708 897 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 BBS2Q9BXC9 721 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 C1QTNF3Q9BXJ4 246 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 TDRD1Q9BXT4 1180 aaKnown RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 TM6SF2Q9BZW4 377 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 LINC00597Q9H2U6 94 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 ACTR5Q9H9F9 607 aaPredicted RBP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SLC28A3Q9HAS3 691 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.3□□□□□ -1.4
RUFY3-210ENST00000512331 ABCB8Q9NUT2 735 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SENP1Q9P0U3 644 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 SLC17A7Q9P2U7 560 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 GRID1Q9ULK0 1009 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 CHKBQ9Y259 395 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 RAI2Q9Y5P3 530 aa6.3□□□□□ -1.4
RUFY3-210ENST00000512331 NUMA1Q14980 2115 aa6.29□□□□□ -1.4
RUFY3-210ENST00000512331 CEP192Q8TEP8 1941 aa6.29□□□□□ -1.4
RUFY3-210ENST00000512331 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
RUFY3-210ENST00000512331 MAGEB16A2A368 324 aa6.29□□□□□ -1.4
RUFY3-210ENST00000512331 HEATR9A2RTY3 570 aa6.29□□□□□ -1.4
RUFY3-210ENST00000512331 ERICH4A6NGS2 130 aa6.29□□□□□ -1.4
RUFY3-210ENST00000512331 EBAG9O00559 213 aa6.29□□□□□ -1.4
RUFY3-210ENST00000512331 SEC14L5O43304 696 aa6.29□□□□□ -1.4
RUFY3-210ENST00000512331 LDB2O43679 373 aa6.29□□□□□ -1.4
RUFY3-210ENST00000512331 BUD23O43709 281 aaKnown RBP6.29□□□□□ -1.4
RUFY3-210ENST00000512331 NKX2-2O95096 273 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms