RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	FRMD1	Q8N878	549 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	DCAF4L2	Q8NA75	395 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	OR2T3	Q8NH03	318 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	TBC1D31	Q96DN5	1066 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	ARHGEF26	Q96DR7	871 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	ALG14	Q96F25	216 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	TMEM68	Q96MH6	324 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	WDFY2	Q96P53	400 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	PEBP4	Q96S96	227 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	PSMB7	Q99436	277 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	ATXN2	Q99700	1313 aa	Known RBP	5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	SH3GL2	Q99962	352 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	FEM1A	Q9BSK4	669 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	NUP85	Q9BW27	656 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	ITPA	Q9BY32	194 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	GAREM1	Q9H706	876 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	PRSS16	Q9NQE7	514 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	GPATCH2L	Q9NWQ4	482 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	ANAPC7	Q9UJX3	599 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	PLA2G4C	Q9UP65	541 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	TNRC6B	Q9UPQ9	1833 aa	Known RBP	5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	NFS1	Q9Y697	457 aa		5.1	□□□□□ -1.59
MATR3-218	ENST00000511978	VPS13A	Q96RL7	3174 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	IGHV1OR15-9	A0A0B4J2B8	117 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978		A0A0D9SEW6	157 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	EDDM13	A0A1B0GTR0	161 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	ILVBL	A1L0T0	632 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	LIPT2	A6NK58	231 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	SOCS6	O14544	535 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	SNAP91	O60641	907 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	ZNF217	O75362	1048 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	LRCH4	O75427	683 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	NKX2-2	O95096	273 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	IPO7	O95373	1038 aa	Known RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	EIF2S1	P05198	315 aa	Known RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	TCF4	P15884	667 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	MIP	P30301	263 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	PCK1	P35558	622 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	PSMD8	P48556	350 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	DHPS	P49366	369 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	TPMT	P51580	245 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	PLK1	P53350	603 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	GALC	P54803	685 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	GEMIN4	P57678	1058 aa	Known RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	BRWD1-AS2	P59051	145 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	TPI1	P60174	286 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	KRT83	P78385	493 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	GNA12	Q03113	381 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	PIGH	Q14442	188 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	MED22	Q15528	200 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	OASL	Q15646	514 aa	Known RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	CA9	Q16790	459 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	TTC31	Q49AM3	519 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	GGNBP1	Q5YKI7	109 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	ZNF776	Q68DI1	518 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	NCEH1	Q6PIU2	408 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	LINGO4	Q6UY18	593 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	LPCAT2	Q7L5N7	544 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	ARHGAP12	Q8IWW6	846 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	CHERP	Q8IWX8	916 aa	Known RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	DCLK2	Q8N568	766 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	NIPA2	Q8N8Q9	360 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	RTL3	Q8N8U3	475 aa	Known RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	TC2N	Q8N9U0	490 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	ZNF564	Q8TBZ8	553 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	PRCC	Q92733	491 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	SIPA1	Q96FS4	1042 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	CCDC42	Q96M95	316 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	CSF3R	Q99062	836 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	CHP1	Q99653	195 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	SNRNP25	Q9BV90	132 aa	Known RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	RSPH9	Q9H1X1	276 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	PCSK1N	Q9UHG2	260 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	OR51B4	Q9Y5P0	310 aa		5.09	□□□□□ -1.59
MATR3-218	ENST00000511978	MEI4	A8MW99	385 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	EEF2K	O00418	725 aa	Known RBP	5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	VCY	O14598	125 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	RNASEH2A	O75792	299 aa	Known RBP	5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	RHOBTB1	O94844	696 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	ZBTB11	O95625	1053 aa	Predicted RBP	5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	MLYCD	O95822	493 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	SCGB1D1	O95968	90 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	IGLV3-19	P01714	112 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	DNTT	P04053	509 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	RET	P07949	1114 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	H2AFZ	P0C0S5	128 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	ACADM	P11310	421 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	SRC	P12931	536 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	NNMT	P40261	264 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	PTGER3	P43115	390 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	SERPINH1	P50454	418 aa	Known RBP	5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	PEX5	P50542	639 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	SEC61B	P60468	96 aa	Known RBP	5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	RPS14	P62263	151 aa	Known RBP	5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	ARF5	P84085	180 aa		5.08	□□□□□ -1.6
MATR3-218	ENST00000511978	CREB5	Q02930	508 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms