RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ID2Q02363 134 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 SRSF11Q05519 484 aaKnown RBP12.74□□□□□ -0.37
SNF8-206ENST00000509989 NSDHLQ15738 373 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 HIST2H2ACQ16777 129 aaPredicted RBP12.74□□□□□ -0.37
SNF8-206ENST00000509989 SGO1Q5FBB7 561 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 PAGE2BQ5JRK9 111 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 ZNF678Q5SXM1 525 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 DEPDC1Q5TB30 811 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 LGSNQ5TDP6 509 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 VWA5B1Q5TIE3 1220 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 KHDRBS2Q5VWX1 349 aaKnown RBP12.74□□□□□ -0.37
SNF8-206ENST00000509989 LIPJQ5W064 366 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 SLC6A19Q695T7 634 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 HIST2H2AA3Q6FI13 130 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 JMJD6Q6NYC1 403 aaPredicted RBP12.74□□□□□ -0.37
SNF8-206ENST00000509989 WDR93Q6P2C0 686 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 TDRPQ86YL5 185 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 KIF2BQ8N4N8 673 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 TEX19Q8NA77 164 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 TTLQ8NG68 377 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 TRPC4APQ8TEL6 797 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 SREK1Q8WXA9 508 aaKnown RBP12.74□□□□□ -0.37
SNF8-206ENST00000509989 NACC2Q96BF6 587 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 MAGEB10Q96LZ2 347 aaPredicted RBP12.74□□□□□ -0.37
SNF8-206ENST00000509989 PTCHD1Q96NR3 888 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 OR1F2PQ96R84 312 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 HBEGFQ99075 208 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 PITHD1Q9GZP4 211 aaPredicted RBP12.74□□□□□ -0.37
SNF8-206ENST00000509989 LHPPQ9H008 270 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 TNFRSF12AQ9NP84 129 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 PLAAQ9Y263 795 aa12.74□□□□□ -0.37
SNF8-206ENST00000509989 CROCCQ5TZA2 2017 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 CCDC189A1A4V9 331 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 URADA6NGE7 173 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 H0YIV9 168 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 SORBS2O94875 1100 aaKnown RBP12.73□□□□□ -0.37
SNF8-206ENST00000509989 CLDN9O95484 217 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 PROCP04070 461 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 SOX11P35716 441 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 CASRP41180 1078 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 RAB38P57729 211 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 TRIM40Q6P9F5 258 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 PAPD4Q6PIY7 484 aaKnown RBP12.73□□□□□ -0.37
SNF8-206ENST00000509989 ATG14Q6ZNE5 492 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 RIPOR1Q6ZS17 1223 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 SCUBE1Q8IWY4 988 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 ACOT4Q8N9L9 421 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 DOK4Q8TEW6 326 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 METTL21AQ8WXB1 218 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 C19orf60Q96EN9 201 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 FAR2Q96K12 515 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 KCNA7Q96RP8 456 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 SERINC2Q96SA4 455 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 CCDC77Q9BR77 488 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 C1QTNF3Q9BXJ4 246 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 FBXW2Q9UKT8 454 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 DAPP1Q9UN19 280 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 NTNG1Q9Y2I2 539 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 ZNF451Q9Y4E5 1061 aa12.73□□□□□ -0.37
SNF8-206ENST00000509989 TNPO3Q9Y5L0 923 aaKnown RBP12.73□□□□□ -0.37
SNF8-206ENST00000509989 A0A1W2PS29 197 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 TCRBV16S1A1N1A0A5B0 115 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 UBFD1O14562 309 aaKnown RBP12.72□□□□□ -0.37
SNF8-206ENST00000509989 B3GALT2O43825 422 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 TMPRSS11DO60235 418 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 PRMT3O60678 531 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 LDB3O75112 727 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 SUPT7LO94864 414 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 SERPINA7P05543 415 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 NUDT17P0C025 328 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 CHN1P15882 459 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 KRT15P19012 456 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 BSGP35613 385 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 DEKP35659 375 aaKnown RBP12.72□□□□□ -0.37
SNF8-206ENST00000509989 ARL1P40616 181 aaPredicted RBP12.72□□□□□ -0.37
SNF8-206ENST00000509989 HTR6P50406 440 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 CCNG1P51959 295 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 MTTPP55157 894 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 HNRNPH2P55795 449 aaKnown RBP12.72□□□□□ -0.37
SNF8-206ENST00000509989 OR4D2P58180 307 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 HERVK_113P63132 956 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 CLCQ05315 142 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 BTBD16Q32M84 506 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 C18orf63Q68DL7 685 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 IGFL2Q6UWQ7 119 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 DGAT2L6Q6ZPD8 337 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 QSOX2Q6ZRP7 698 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 CUZD1Q86UP6 607 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 OR4N5Q8IXE1 308 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 KBTBD2Q8IY47 623 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 NFAM1Q8NET5 270 aaPredicted RBP12.72□□□□□ -0.37
SNF8-206ENST00000509989 ACMSDQ8TDX5 336 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 CAVIN3Q969G5 261 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 ATP6V1E2Q96A05 226 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 CMTM7Q96FZ5 175 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 NTMT1Q9BV86 223 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 ERVK-6Q9BXR3 956 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 GSTO2Q9H4Y5 243 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 PRM3Q9NNZ6 103 aa12.72□□□□□ -0.37
SNF8-206ENST00000509989 ANAPC2Q9UJX6 822 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms