RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 GEMIN4P57678 1058 aaKnown RBP4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 RPS18P62269 152 aaKnown RBP4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 GCNT1Q02742 428 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 ILF3Q12906 894 aaKnown RBP eCLIP4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 CYTH1Q15438 398 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 CHRNA6Q15825 494 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 RPE65Q16518 533 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 TRNP1Q6NT89 227 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 PNCKQ6P2M8 343 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 C11orf57Q6ZUT1 292 aaPredicted RBP4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 BNIPLQ7Z465 357 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 NLRP14Q86W24 1093 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 LRRC57Q8N9N7 239 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 ZNF397Q8NF99 534 aaPredicted RBP4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 OR10G6Q8NH81 332 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 HCAR2Q8TDS4 363 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 SLC37A2Q8TED4 501 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 CT55Q8WUE5 264 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 PNPLA2Q96AD5 504 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 GDAP1L1Q96MZ0 367 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 ZNF396Q96N95 335 aaPredicted RBP4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 BARD1Q99728 777 aaKnown RBP4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 IFT27Q9BW83 186 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 NUDT9Q9BW91 350 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 ING2Q9H160 280 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 CXorf56Q9H5V9 222 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 AKIRIN1Q9H9L7 192 aaPredicted RBP4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 NLKQ9UBE8 527 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 SUFUQ9UMX1 484 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 NEU3Q9UQ49 428 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 NTNG1Q9Y2I2 539 aa4.91□□□□□ -1.62
CALCOCO2-212ENST00000509014 A0A1B0GVL5 298 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 OR6C68A6NDL8 312 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 BECN2A8MW95 431 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 PRSS44E7EML9 344 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 FAM72CH0Y354 149 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 LRRTM2O43300 516 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 MED7O43513 233 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 BUB1O43683 1085 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 DPM1O60762 260 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 LRCH4O75427 683 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 IGSF6O95976 241 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 F9P00740 461 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 IGKV2-30P06310 120 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 POLBP06746 335 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 ANKRD34CP0C6C1 535 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 KRT5P13647 590 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 PFKFB1P16118 471 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 ITGA3P26006 1051 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 HNRNPH3P31942 346 aaKnown RBP4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 GARSP41250 739 aaKnown RBP4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 RGRP47804 291 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 RHOAP61586 193 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 RAD51Q06609 339 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 FOXM1Q08050 763 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 PRTGQ2VWP7 1150 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 PTPN20Q4JDL3 420 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 RAB6CQ53S08 254 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 FAM72AQ5TYM5 149 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 ATG16L1Q676U5 607 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 AWAT2Q6E213 333 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 FAM72DQ6L9T8 149 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 SPNS3Q6ZMD2 512 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 DPPA4Q7L190 304 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 FAM72BQ86X60 149 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 CAMK1DQ8IU85 385 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 SFRP1Q8N474 314 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 FDCSPQ8NFU4 85 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 STAMBPL1Q96FJ0 436 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 NSMCE3Q96MG7 304 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 OR6C1Q96RD1 312 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 NPLQ9BXD5 320 aaPredicted RBP4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 RAB6CQ9H0N0 254 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 ACTL8Q9H568 366 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 UPF2Q9HAU5 1272 aaKnown RBP4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 LHX9Q9NQ69 397 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 GRHL1Q9NZI5 618 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 OGFRQ9NZT2 677 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 ARMCX3Q9UH62 379 aaPredicted RBP4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 SLC17A4Q9Y2C5 497 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 RTTNQ86VV8 2226 aa4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 MN1Q10571 1320 aaPredicted RBP4.9□□□□□ -1.63
CALCOCO2-212ENST00000509014 HEATR9A2RTY3 570 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 TRIM49BA6NDI0 452 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 SH2D7A6NKC9 451 aaPredicted RBP4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 A8MX80 341 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 C21orf140B9A014 251 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 P4HA2O15460 535 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 ZG16O60844 167 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 SPAG6O75602 509 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 C9P02748 559 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 IVLP07476 585 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 FGF5P12034 268 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 PTPN4P29074 926 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 CASP14P31944 242 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 ACTR1BP42025 376 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 PRCPP42785 496 aa4.89□□□□□ -1.63
CALCOCO2-212ENST00000509014 MAPK9P45984 424 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms