RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 FAM208AQ9UK61 1670 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 ADAMTS7Q9UKP4 1686 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 PALLDQ8WX93 1383 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 C4AP0C0L4 1744 aa4.12□□□□□ -1.75
TOPBP1-206ENST00000508524 MAP2P11137 1827 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 EYSQ5T1H1 3165 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 C17orf105B2RV13 164 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 F3P13726 295 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 CD59P13987 128 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 AOC1P19801 751 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 RAB28P51157 221 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 ITPK1Q13572 414 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 ALDH1L2Q3SY69 923 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 MARCH9Q86YJ5 346 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 CCDC60Q8IWA6 550 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 GBP7Q8N8V2 638 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 ZPLD1Q8TCW7 415 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 ATF6BQ99941 703 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 GTSE1Q9NYZ3 720 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 WDR35Q9P2L0 1181 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 BAIAP2L1Q9UHR4 511 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 PILRBQ9UKJ0 227 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 TSPAN16Q9UKR8 245 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 STYXL1Q9Y6J8 313 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 LAMA2P24043 3122 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 USP47Q96K76 1375 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 MUC3AQ02505 3323 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 CACNA1AO00555 2505 aa4.11□□□□□ -1.75
TOPBP1-206ENST00000508524 PRUNE2Q8WUY3 3088 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 ADAMTSL1Q8N6G6 1762 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 LRCH4O75427 683 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 SAP30O75446 220 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 AKR1B1P15121 316 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 CPT2P23786 658 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 ZNF146Q15072 292 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 ATP1A1-AS1Q5TC04 95 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 NAA16Q6N069 864 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 TIPARPQ7Z3E1 657 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 ANKRD33Q7Z3H0 272 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 ZNF584Q8IVC4 421 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 HDAC11Q96DB2 347 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 SPATA33Q96N06 139 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 UBA5Q9GZZ9 404 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 NLGN3Q9NZ94 848 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 IL36AQ9UHA7 158 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 IL16Q14005 1332 aa4.1□□□□□ -1.75
TOPBP1-206ENST00000508524 GON4LQ3T8J9 2241 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 A0A087WZ39 114 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 TRAFD1O14545 582 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 GALR3O60755 368 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 IGKV3-15P01624 115 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 DUTP33316 252 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 NDST2P52849 883 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 FKBP3Q00688 224 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 MAP2K1Q02750 393 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 CACNG1Q06432 222 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 DUSP5Q16690 384 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 TMEM266Q2M3C6 531 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 FAM182AQ5T1J6 154 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 C11orf53Q8IXP5 236 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 SLC22A15Q8IZD6 547 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 PI4KAP1Q8N8J0 262 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 OR52B6Q8NGF0 335 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 OR4C15Q8NGM1 316 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 PGAP3Q96FM1 320 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 CAPNS2Q96L46 248 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 CFAP57Q96MR6 1250 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 NEDD4LQ96PU5 975 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 FZD8Q9H461 694 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 XAB2Q9HCS7 855 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 TTC21BQ7Z4L5 1316 aa4.09□□□□□ -1.75
TOPBP1-206ENST00000508524 RTCAO00442 366 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 PHOX2AO14813 284 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 MELTFP08582 738 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 RGPD2P0DJD1 1756 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 MYBL1P10243 752 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 GP9P14770 177 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 SFTPDP35247 375 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 HSD17B3P37058 310 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 NEDD4P46934 1319 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 DEFB115Q30KQ5 88 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 FAM106AQ4KMX7 169 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 EIPR1Q53HC9 387 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 CFAP58Q5T655 872 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 PRSS55Q6UWB4 352 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 CEACAM19Q7Z692 300 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 SEPT1Q8WYJ6 367 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 PYCR2Q96C36 320 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 ADNPQ9H2P0 1102 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 FBXL4Q9UKA2 621 aa4.08□□□□□ -1.76
TOPBP1-206ENST00000508524 CCDC88AQ3V6T2 1871 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 LTN1O94822 1766 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 CARMIL3Q8ND23 1372 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 HEG1Q9ULI3 1381 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 SYNDIG1LA6NDD5 238 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 GPRIN2O60269 458 aa4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 PCP11498 1178 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-206ENST00000508524 ATP4BP51164 291 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms