RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 OR4L1Q8NH43 312 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 MAGEC3Q8TD91 643 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 BLOC1S5Q8TDH9 187 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 CDKN2AIPNLQ96HQ2 116 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 NR1H4Q96RI1 486 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-206ENST00000507875 GPR22Q99680 433 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 MESP1Q9BRJ9 268 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 MRI1Q9BV20 369 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 LRMDAQ9H2I8 198 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 SAR1AQ9NR31 198 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 PKD2L2Q9NZM6 624 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 IL17CQ9P0M4 197 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 HAO1Q9UJM8 370 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 A0A087X1B8 175 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 L7N2F9 121 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 PSMD9O00233 223 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 SYNCRIPO60506 623 aaKnown RBP6.83□□□□□ -1.32
CLCN3-206ENST00000507875 RNASEH1O60930 286 aaKnown RBP6.83□□□□□ -1.32
CLCN3-206ENST00000507875 GLRA3O75311 464 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 SLC43A1O75387 559 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 VAPBO95292 243 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 TPOP07202 933 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 CD72P21854 359 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 CSF2RBP32927 897 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 PLA2G5P39877 138 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 RASSF2P50749 326 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF134P52741 427 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 POLE2P56282 527 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 CACNG1Q06432 222 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 ASPHQ12797 758 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF234Q14588 700 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 CDKN3Q16667 212 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF750Q32MQ0 723 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 FASTKD1Q53R41 847 aaKnown RBP6.83□□□□□ -1.32
CLCN3-206ENST00000507875 FAM45BPQ6NSW5 357 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 CAMK1DQ8IU85 385 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 MDGA1Q8NFP4 955 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 FAM45AQ8TCE6 357 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 NETO1Q8TDF5 533 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 RPL10LQ96L21 214 aaKnown RBP6.83□□□□□ -1.32
CLCN3-206ENST00000507875 RAB3IPQ96QF0 476 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-206ENST00000507875 GABRG3Q99928 467 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 TM6SF2Q9BZW4 377 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 ZDHHC6Q9H6R6 413 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 SPACA1Q9HBV2 294 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 HEY2Q9UBP5 337 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 SLCO3A1Q9UIG8 710 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 CDH22Q9UJ99 828 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 FBXO5Q9UKT4 447 aa6.83□□□□□ -1.32
CLCN3-206ENST00000507875 SPECC1L-ADORA2AF8WAN1 911 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 H3BMM5 538 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 CD3EAPO15446 510 aaKnown RBP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SNNO75324 88 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 AGFG2O95081 481 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 CBX6O95503 412 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 TOP3BO95985 862 aaKnown RBP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 LYL1P12980 280 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 ACP5P13686 325 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 ANXA8P13928 327 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 RPS3P23396 243 aaKnown RBP eCLIP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SPAM1P38567 509 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 CSRP3P50461 194 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 GBX2P52951 348 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 PRKCQQ04759 706 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 ITGA9Q13797 1035 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 TMEM52BQ4KMG9 183 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 TMEM196Q5HYL7 178 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 C9orf64Q5T6V5 341 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 ANXA8L1Q5VT79 327 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 CES4AQ5XG92 561 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SEM1Q6ZVN7 128 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SLC44A3Q8N4M1 653 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 WDR48Q8TAF3 677 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 VOPP1Q96AW1 172 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 PEX11GQ96HA9 241 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 NSMCE3Q96MG7 304 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SLC46A1Q96NT5 459 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 TUBB6Q9BUF5 446 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 GSTO2Q9H4Y5 243 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 BAIAP2L1Q9UHR4 511 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 STK38LQ9Y2H1 464 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 LRRK1Q38SD2 2015 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 TRBV5-4A0A0C4DH59 114 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 QSOX1O00391 747 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 MYL2P10916 166 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 ITGALP20701 1170 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 FDXRP22570 491 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 TYK2P29597 1187 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SLC8A1P32418 973 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 WNT5AP41221 380 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 PTGER3P43115 390 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 CBX5P45973 191 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 STC1P52823 247 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 RAP2BP61225 183 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 GRSF1Q12849 480 aaKnown RBP eCLIP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SGCAQ16586 387 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 CCDC153Q494R4 210 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 N4BP2L1Q5TBK1 243 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 UGT3A1Q6NUS8 523 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SERPINA13PQ6UXR4 307 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms